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Name : gspE (GNIT_3468) Accession : YP_004873555.1 Strain : Glaciecola nitratireducens FR1064 Genome accession: NC_016041 Putative virulence/resistance : Virulence Product : type II secretory pathway, ATPase PulE-like protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3893412 - 3894986 bp Length : 1575 bp Strand : + Note : - DNA sequence : ATGACTGAAGCTATTGACAAAGCAGCGACTGATCTTAGTTTAGAAGAAACCGAAGCGCTCGTTACCGACGAGGTCACCGA TGGTGTGCCTGAGGAAGCCGAGCCCTTAGCTGCCTTACAGCTTCCTTTTAGCTTTGCCAAGCGTCATAAAGTATTGGTTG AGTCGGCGCACGAACCGGTAAAGGTTTATCACACGCCAAGCACCGACTTTTCCGTATTTGCGGAAGTGAGACGCTTTTTA GACCAAACCTTTGTACTTGAAGAAATAGCTGAAAACCGCTTTGAAGAACTGCTCACCAGCAGCTTCCAGCGTGATTCAAG CGCAGCGAAGCAGTTGATGGAAGACTTAGGTAACGAAAGCGACCTGCTGTCATTAGCCGAAGACCTACCCGATACCGAAG ACTTGCTCGAAAGTGAAGGCGACGCACCTATTATTCGCTTAATTAATGCCATGTTGGGTGAAGCGATTAAAGAGGGTGCC TCAGATATTCACATTGAAACCTTTGAAAACCAGCTTGTTGTGCGCTTCCGCGTTGACGGCGTGTTGCGTGAAATACTGCG CCCAAATCGCAAAATGTCATCCATGTTAGTCTCGCGTATTAAGGTCATGTCCAAAATGGATATTGCTGAGAAACGCGTGC CGCAGGATGGCCGCATTAGCTTGCGTATCGCAGGCCGAGCGGTTGACGTGCGTGTATCCACCATGCCATCGAGCCACGGA GAGCGTGTTGTATTGCGTTTGCTCGACAAAAATAACGCCCGCCTTGATTTGAAAGATTTAGGCATGACGCTGGACAACAG AAACCACTTTTCAAGCTTAATTCGCAAGCCACATGGCATCATGCTGGTTACCGGCCCGACGGGCTCGGGGAAAAGTACGA CACTGTATGCAGGTTTGAGCGAAATAAATTCCAAAGACCGTAATATTCTGACCGTTGAAGATCCTATCGAATTTGACTTA GAGGGTATTGGACAAACACAAGTAAACCCGCGCGTCGATATGACCTTCGCGAGAGGATTACGGGCTATATTACGTCAGGA TCCGGATGTCGTGATGGTGGGTGAAATTCGAGATATTGAAACAGCACAAATTGCAGTTCAGGCCAGTTTAACTGGCCACT TGGTATTATCGACCCTGCATACCAATACAGCCGCGGGCGCAATTACGCGTTTAGAGGACATGGGCATTGAACCCTTCTTG CTATCAAGCAGCTTGCTCTCGGTGCTTTCACAACGTCTGGTACGTAAGCTGTGTAAAGAGTGCAAAAAGCCACACGAACC AAATAGTGCAGAACGCGAAACATTAAGCGTTGCTGAAGGCGAACAAGTGGTCATTTATCGTCCCGTTGGCTGCACTGCAT GTAACCACACTGGTTACCGCGGACGCACCGGTATTCATGAGCAGCTAATTGTGGATGAACATATTCGCGAAATGATGCAC GAAGGAAAGGGAGAGCAAGTGATAGAAAAATATATGCGCAAAAACACGCCTTCTATTCGTCAAGACGGGTGTGACAAAGT GTTGCTCGGCGTTACCTCTTTAGAAGAAGTTCTACGAGTTACCAGAGAAGAATAA Protein sequence : MTEAIDKAATDLSLEETEALVTDEVTDGVPEEAEPLAALQLPFSFAKRHKVLVESAHEPVKVYHTPSTDFSVFAEVRRFL DQTFVLEEIAENRFEELLTSSFQRDSSAAKQLMEDLGNESDLLSLAEDLPDTEDLLESEGDAPIIRLINAMLGEAIKEGA SDIHIETFENQLVVRFRVDGVLREILRPNRKMSSMLVSRIKVMSKMDIAEKRVPQDGRISLRIAGRAVDVRVSTMPSSHG ERVVLRLLDKNNARLDLKDLGMTLDNRNHFSSLIRKPHGIMLVTGPTGSGKSTTLYAGLSEINSKDRNILTVEDPIEFDL EGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDIETAQIAVQASLTGHLVLSTLHTNTAAGAITRLEDMGIEPFL LSSSLLSVLSQRLVRKLCKECKKPHEPNSAERETLSVAEGEQVVIYRPVGCTACNHTGYRGRTGIHEQLIVDEHIREMMH EGKGEQVIEKYMRKNTPSIRQDGCDKVLLGVTSLEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-155 | 63 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-155 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_004873555.1 | type II secretory pathway, ATPase PulE-like protein | VFG0182 | Protein | 2e-145 | 64 |
| gspE | YP_004873555.1 | type II secretory pathway, ATPase PulE-like protein | VFG2048 | Protein | 3e-152 | 63 |
| gspE | YP_004873555.1 | type II secretory pathway, ATPase PulE-like protein | VFG1876 | Protein | 6e-136 | 58 |
| gspE | YP_004873555.1 | type II secretory pathway, ATPase PulE-like protein | VFG2426 | Protein | 4e-73 | 47 |
| gspE | YP_004873555.1 | type II secretory pathway, ATPase PulE-like protein | VFG1880 | Protein | 1e-83 | 44 |
