Gene Information

Name : GNIT_2730 (GNIT_2730)
Accession : YP_004872820.1
Strain : Glaciecola nitratireducens FR1064
Genome accession: NC_016041
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 3026624 - 3028618 bp
Length : 1995 bp
Strand : -
Note : -

DNA sequence :
ATGCCATCACGTCGTCATCTAGCCAACGCCATCCGTGCGTTAAGTATGGACGCTGTTCAAAAAGCGAAGTCAGGTCACCC
TGGTGCACCAATGGGAATGGCAGATATTGCTCAAGTATTGTGGACAGATTTTATGTCGCACAATCCACAAAACCCGAATT
GGGCAAACCGAGATCGCTTTGTGCTGTCGAACGGTCATGGCTCAATGTTGCTGTATTCATTATTGCATCTTACAGGTTAC
GAATTACCCATTGAGGAATTAAAACAGTTCCGTCAATTACATGCAAAAACACCAGGTCATCCTGAATATGGTTATGCGCC
AGGTGTTGAAACAACCACGGGTCCATTAGGACAAGGCATCACTAATGCCGTTGGTATGGCGATTGCTGAAAAAGTGCTTG
CTGCACAATTTAACCGCGATAAATTTGCAGTTGTCGATCACCATACTTATACATTCCTAGGCGATGGTTGCTTGATGGAA
GGCATCTCACATGAAGCTTGTTCTCTTGCGGGTACGTTAGGTTTAGGCAAGCTAGTTGCGTTTTGGGATGACAACGGTAT
CTCTATTGACGGTGAAGTCGAAGGCTGGTTTAGCGATGATACGCCAAAACGTTTCGAGTCTTACGGCTGGCAGGTGATCA
GTGGCGTTGATGGTCATGACCCTGAGCAAATTAGTGCTGCTATTGAGAAAGCTAAAGGGGATACGACGCGACCAACGTTA
ATTTGCTGCAAAACAGTGATCGGTTTTGGTTCACCAAACAAGCAAGGCAAAGAAGATTGCCATGGTGCACCACTAGGTGA
TGCTGAAATTGAGCTTGTAAGAAAAGAACTGGATTGGCCATACGCGCCATTTGAAATTCCGGCTGACGTTTATGCTGGTT
GGGATGCAAAACAAAAAGGTGCTTCAGAAGAAGCGGCCTGGGAAGCGCTATTTGCTGATTATCAGCAGGCTTATCCTGAG
TTAGCCCAAGAGTTTGTTCGCAGAAAAAACAACGCATTACCAGAATCATGGAGTCACGAGTCAGCTAAGTATATTCGCAG
CCTACAAGATAATCCTGAAAACATTGCAACACGCAAAGCATCACAAAATGCACTTAATGCATTTGGACCGTTGTTACCTG
AACTATTAGGTGGCTCTGCCGACCTTGCTGGTTCAAACTTAACTATTTGGTCTGGTAGCAAGGGTGTAAGTAAAGATGAT
GCATCAGGCAACTATCTATATTACGGTGTTCGTGAATTTGGTATGTCGGCTATGATGAACGGCATTACTCTCTACGGCGG
TTTTAAAGCTTACGGTGCGACCTTCTTAATGTTCATGGAATATGCTCGCAACGCTGTAAGAATGGCGGCGCTGATGAAGC
AGCCTTGTATTTTCGTATACACTCATGACTCTATTGGCTTGGGTGAAGATGGACCAACGCATCAGCCGGTAGAGCAAGTT
GTTTCATTGCGCGCGACACCAAACTTAGATAACTGGCGTCCATGCGACCAAGTTGAATCTGCGATTGCCTGGAAAGCGGC
GATTGAAAGAACTGATGGGCCAACAACGCTGATATTTACTCGCCAAGGGTTACCACAGCAAAACAGAAGTGCGCAGCAAT
TAAGTGACGTAGAACGAGGTGGCTATGTGCTAGTTGATAGCGATTCGGCGCCGCAAATTATCTTGATTGCGACAGGTTCT
GAAGTACATTTGGCGGTTGAAGCGGCAGCGAAACTAAACGCTGAAGGTTTACCAACGCGAGTAGTATCAATGCCATGCAC
TGACTTGTTTGATCGTCAATCAGCAGAGTATAAAGAAAGCGTGTTGCCACGAGCGACTACCAAACGCGTGGCGGTTGAAG
CTCTTGCCAAAGACACTTGGTATAAATATGTGGGCCTAGATGGCGCAGTTGTGGGCATGGATACCTTTGGCGAATCTGCG
CCAGCAGGCGATTTGTTTGCTTACTTCAATATTACAGCTGACGCAGTTTACAACGTTGCTAGAGGATTGAAATAA

Protein sequence :
MPSRRHLANAIRALSMDAVQKAKSGHPGAPMGMADIAQVLWTDFMSHNPQNPNWANRDRFVLSNGHGSMLLYSLLHLTGY
ELPIEELKQFRQLHAKTPGHPEYGYAPGVETTTGPLGQGITNAVGMAIAEKVLAAQFNRDKFAVVDHHTYTFLGDGCLME
GISHEACSLAGTLGLGKLVAFWDDNGISIDGEVEGWFSDDTPKRFESYGWQVISGVDGHDPEQISAAIEKAKGDTTRPTL
ICCKTVIGFGSPNKQGKEDCHGAPLGDAEIELVRKELDWPYAPFEIPADVYAGWDAKQKGASEEAAWEALFADYQQAYPE
LAQEFVRRKNNALPESWSHESAKYIRSLQDNPENIATRKASQNALNAFGPLLPELLGGSADLAGSNLTIWSGSKGVSKDD
ASGNYLYYGVREFGMSAMMNGITLYGGFKAYGATFLMFMEYARNAVRMAALMKQPCIFVYTHDSIGLGEDGPTHQPVEQV
VSLRATPNLDNWRPCDQVESAIAWKAAIERTDGPTTLIFTRQGLPQQNRSAQQLSDVERGGYVLVDSDSAPQIILIATGS
EVHLAVEAAAKLNAEGLPTRVVSMPCTDLFDRQSAEYKESVLPRATTKRVAVEALAKDTWYKYVGLDGAVVGMDTFGESA
PAGDLFAYFNITADAVYNVARGLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 68
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 65