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Name : GNIT_2482 (GNIT_2482) Accession : YP_004872572.1 Strain : Glaciecola nitratireducens FR1064 Genome accession: NC_016041 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2733054 - 2734787 bp Length : 1734 bp Strand : - Note : - DNA sequence : ATGAGTTCTCAGGCCGTTTGGGCTGTCGTAGCTGGAACAATGTTATCTACCGCAGCATTGGTACTTATAGCGTTTTTCTC GTCAACGGCAGTTCCTAGAACAATGCCTTTAATATACTGTGCCCTTATTTTGTTGTCAGTTGGCGGCGCTAGACTGTTGG TCAGAGCTCTAGTGACCCAGTTTACCGGTTTAAATAAGCTTCCGGTAGTTATATACGGTGCAGGGTCAGCAGGCCGTCAG TTGGCGACAGGTATTGCCACAGGATTAGAGTTCTATGTTTCTGCATTTATCGACGATGATAAGAGCAAACATGGTTCTGT CATCCAGGGTGTTCCAGTAATATCACTCTTTGAATTGAAATCACTTGTAGAAGCTGGGAAAGCGACCAAAGTTTTACTAG CGTTGCCGAGCGCCAGTCGTTCTGAACGAAACCGCGTTATTAATTCTTTGGAAAAATATCAAGTTCAAGTTCAAACAATC CCGGGCATAAAAGATGTCATAGAGGGAAATATTAACCCAGCAGAATTCGTTGACGTTGAAATTGAGGACTTACTAGGACG CGAACCGGTGATTCCTCTACCACAGTTAATGGCGCAAAATATTACCGCTAAAAACGTTATGGTGAGTGGGGCTGGCGGGT CAATTGGTGCTGAATTGTGTCGTCAAATTATTAAGTTCAAACCTACTACACTAGTGCTCCTTGAGCTATCTGAATTTGCT TTGTATGAAATCGAAAAAGAGCTCAGCGAATATATAACTAAAAATGGGCTGAAAATTAAGCTTTATCCACTTCTAGGTTC GGTGCAGCACATCAATCGCGTCGAAAACGTGATGAGAGCTTTCAATATCAATACCATTTACCACGCAGCGGCATACAAGC ATGTTCCATTGGTTGAACACAACGTCGTTGAAGGAATAAGAAACAATGTATTTGGCACATACTATGCTGCTAGAGCAGCA ATCAATGCGGGAGCAGAAACTTTTGTGCTTGTTTCTACCGATAAAGCGGTACGTCCAACCAGCGTCATGGGCGCTTCGAA ACGAATGGCTGAATTAGTCTTACAGGCGTTATCGCAGGCATCATTCAATAAAAACACTAGATTTTGCATGGTCCGCTTCG GCAACGTGCTGGGCTCATCAGGATCTGTATTACCGCTATTTAGACGTCAGATTAAGGAAGGTGGACCTATAACCCTTACA CATGAAGACATTACCAGATACTTCATGACAAATTCAGAGGCTGCGCAGCTTGTTATTCAAGCTGGTGCTATGGGTAAAGG TGGTGATGTTTTTGTGTTGGACATGGGTGATTCCGTAAAAATAAAAGACCTAGCTGAAAAGTTGATCCGTTTGTCTGGAC TAGAAATTAAAGACGACTCGAACCCGAATGGTGACATTTCAATCGAATATACAGGACTTCGTCCAGGCGAAAAGCTATTT GAAGAACTGCTGATTGGCGACAATGTTCACGACACTTTTCATGAGCGTATCATGACGGCAAATGAAGCTATGTTGACTTG GCAAGACTTGGAGCCGATGCTTGATGAGTTGGAACAAATGTGCCATAACTTTGACCACGAAGGTATCAGAGAAATATTAC TAAACGCCCCTACTGGTTTTAATCCTTCTGATGGTATTTGTGATTTAGTATGGCTTGCACGAAATCCAGTCGAGTCTCAA ACTCAATCTGCTGAAGTGATAAACTTGCGAAGAACGAAGGATCGTATTAATTAA Protein sequence : MSSQAVWAVVAGTMLSTAALVLIAFFSSTAVPRTMPLIYCALILLSVGGARLLVRALVTQFTGLNKLPVVIYGAGSAGRQ LATGIATGLEFYVSAFIDDDKSKHGSVIQGVPVISLFELKSLVEAGKATKVLLALPSASRSERNRVINSLEKYQVQVQTI PGIKDVIEGNINPAEFVDVEIEDLLGREPVIPLPQLMAQNITAKNVMVSGAGGSIGAELCRQIIKFKPTTLVLLELSEFA LYEIEKELSEYITKNGLKIKLYPLLGSVQHINRVENVMRAFNINTIYHAAAYKHVPLVEHNVVEGIRNNVFGTYYAARAA INAGAETFVLVSTDKAVRPTSVMGASKRMAELVLQALSQASFNKNTRFCMVRFGNVLGSSGSVLPLFRRQIKEGGPITLT HEDITRYFMTNSEAAQLVIQAGAMGKGGDVFVLDMGDSVKIKDLAEKLIRLSGLEIKDDSNPNGDISIEYTGLRPGEKLF EELLIGDNVHDTFHERIMTANEAMLTWQDLEPMLDELEQMCHNFDHEGIREILLNAPTGFNPSDGICDLVWLARNPVESQ TQSAEVINLRRTKDRIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-77 | 44 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 9e-76 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GNIT_2482 | YP_004872572.1 | polysaccharide biosynthesis protein | VFG0029 | Protein | 6e-116 | 50 |
| GNIT_2482 | YP_004872572.1 | polysaccharide biosynthesis protein | VFG1300 | Protein | 9e-76 | 42 |
