Gene Information

Name : GNIT_1806 (GNIT_1806)
Accession : YP_004871909.1
Strain : Glaciecola nitratireducens FR1064
Genome accession: NC_016041
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1989174 - 1989404 bp
Length : 231 bp
Strand : -
Note : -

DNA sequence :
ATGACTACCACCCTAGAACCATTCTTAAAAGAGAGAGTCATTCCACTTACCCGCATACTGAGAAGAAAAGAAGTATTGCA
GTTATGTGGCATTGGACAGACGCATCTCTATGATCTAATCAAACGAAACGAATTCCCCAGACCAGTAAACCTTACGGGCA
AAATTGTAGGCTGGGTAGATAACGAAATTCAAGATTGGATTGATACAAAAATACAACAAAGGGATCAATAA

Protein sequence :
MTTTLEPFLKERVIPLTRILRRKEVLQLCGIGQTHLYDLIKRNEFPRPVNLTGKIVGWVDNEIQDWIDTKIQQRDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 6e-09 43
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 43
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 3e-10 43
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 2e-10 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GNIT_1806 YP_004871909.1 phage transcriptional regulator, AlpA VFG1141 Protein 8e-11 43