Gene Information

Name : GNIT_1743 (GNIT_1743)
Accession : YP_004871849.1
Strain : Glaciecola nitratireducens FR1064
Genome accession: NC_016041
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.-
Position : 1926854 - 1928068 bp
Length : 1215 bp
Strand : -
Note : -

DNA sequence :
ATGTCTAAAATTAATCGCTCTAGTAAGTTAGATAATGTGTACTACGATATTCGTGGCCCCATATTAGAACAAGCAAACAA
AATGGAAGAAGCTGGAGAGAGAATATTGAAACTCAATATTGGCAACCCAGCTCCATTTGGCTTTGAAGCCCCCGACGATA
TTTTGAAGGACGTTATATACCAACTACCTAGCGCACAAGGCTATACCGATTCTCAAGGCATCTACAGCGCAAGAGTTGCG
GTGATGCAGTATTATCAGCAAATGGGTATAAAACACATTCAAGTAAAAGACATCTACTTGGGTAATGGCGTGAGTGAGCT
AATCATGTTATCCATGCAAGCATTATTGAATAATGGCGATGAAGTGCTGCTACCCGCGCCTGATTATCCCCTTTGGACGG
CCGCGGTCAATTTATCATCAGGCACAGCCGTGCACTACCGATGTGATGAGCAAGCGGATTGGTTTCCAGATTTGCAAGAC
ATCGAATCAAAGATTACAAAAAATACAAAAGCAATCGTATTGATTAATCCAAATAACCCAACCGGCGCGGTTTATAGCGA
AGCACTGTTAAATCAAGTTGCCGATTTAGCGCGCAAATATAACTTAATCATATTCAGCGACGAGATTTACGATAAAATAC
TGTACGACAACGCAAAGCACACTTGTATTGCCTCCCTTGCCCCCGACTTATTTTGTGTCACGTTCAGTGGTTTGAGTAAA
AACTATCGCGTTGCCGGTTTCAGGGCTGGTTGGATGTTAGTCAGTGGTGATAAACAATCTGCGCAAAGTTATATAGAAGG
ATTAACTATTTTATCCTCCATGCGGATGTGCGCCAACGTGCCGTGTCAACATGCGATTCAAACAGCTTTAGGTGGATATC
AGAGTATTAATGATTTGGTCACTGGTGACGGCCGCTTATTATCACAACGAAATATAGCTTTCGATGGTCTCAACGACATT
GACGGTGTGACTTGTGTAAAACCGATGGGAGCGATGTATTGTTTTGCCAAAGTGGACACCAAAAAATTCAATATCTCCAG
TGATGTCAATATGGTGCTCGACTTACTTAATAAAGAAAAGATCTTGCTGGTGCATGGCAGCGCTTTCAATCTGCAGGAAG
GATGCTATTTCAGGTTGGTATTTCTTCCACACAAAGAGCAATTATCACCAGCCCTTTCACAAATGAAACGTTTTTTTAGT
AATTATCAACAATGA

Protein sequence :
MSKINRSSKLDNVYYDIRGPILEQANKMEEAGERILKLNIGNPAPFGFEAPDDILKDVIYQLPSAQGYTDSQGIYSARVA
VMQYYQQMGIKHIQVKDIYLGNGVSELIMLSMQALLNNGDEVLLPAPDYPLWTAAVNLSSGTAVHYRCDEQADWFPDLQD
IESKITKNTKAIVLINPNNPTGAVYSEALLNQVADLARKYNLIIFSDEIYDKILYDNAKHTCIASLAPDLFCVTFSGLSK
NYRVAGFRAGWMLVSGDKQSAQSYIEGLTILSSMRMCANVPCQHAIQTALGGYQSINDLVTGDGRLLSQRNIAFDGLNDI
DGVTCVKPMGAMYCFAKVDTKKFNISSDVNMVLDLLNKEKILLVHGSAFNLQEGCYFRLVFLPHKEQLSPALSQMKRFFS
NYQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-118 58
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-118 58
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-118 58
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 6e-118 58