Gene Information

Name : GNIT_1536 (GNIT_1536)
Accession : YP_004871647.1
Strain : Glaciecola nitratireducens FR1064
Genome accession: NC_016041
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1678715 - 1679380 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence : 
ATGAGACTACTACTAGTTGAAGATGATACTCGCCTTGCTGAAGAATTAAGCAAGTCATTGCGACACAAAGGCTATGCCAT
CACGCATATGCCTTCTGCCAAAAGCGCTTTAGATTCGTTAGCGAGTAATGAGTTTGCAATGATGATACTCGATTTGGGCC
TGCCAGATATGGACGGCATTGAATTGCTGAAAATTGCCAAGAAAAAATACGCAGACTTGTCCGTCATTATTCTTACTGCA
AGAGACACTACTACCGATAAAATTGACGGTTTAGATGCAGGAGCTGATGACTATCTCGCAAAGCCCTTTGATATTGAAGA
ATTATTAGCGCGTTTAAGAGCGATGGAGCGTCGCTTAGGCACCGCAACGTCTTCTTTAATCGACATAAATGAGGTAAGTT
TAGACGTCGCCTCGCACGAGCTTGGGGTTAAAGGCGAGAAAGTTGAACTGCCGCGACGCGAGTTCATGCTGCTTAAAGCA
TTAATGGAGAACCATGGCAGGATACAAAGCAAACAACACCTCGAAAAAACGCTGTATGAATGGGGTGAAGAAGTCAGTAG
CAATGCCATTGAAGTGCACATTCATAATTTGCGAAAACGGCTACCTGAACAGTTTATCAAAACCATTAGAGGCGTTGGCT
ATAGCGTTCCTAAACAAGCAAGGTAA

Protein sequence : 
MRLLLVEDDTRLAEELSKSLRHKGYAITHMPSAKSALDSLASNEFAMMILDLGLPDMDGIELLKIAKKKYADLSVIILTA
RDTTTDKIDGLDAGADDYLAKPFDIEELLARLRAMERRLGTATSSLIDINEVSLDVASHELGVKGEKVELPRREFMLLKA
LMENHGRIQSKQHLEKTLYEWGEEVSSNAIEVHIHNLRKRLPEQFIKTIRGVGYSVPKQAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-24 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GNIT_1536 YP_004871647.1 two component transcriptional regulator BAC0487 Protein 9e-27 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GNIT_1536 YP_004871647.1 two component transcriptional regulator VFG0473 Protein 2e-29 45