Gene Information

Name : GNIT_1407 (GNIT_1407)
Accession : YP_004871519.1
Strain : Glaciecola nitratireducens FR1064
Genome accession: NC_016041
Putative virulence/resistance : Virulence
Product : transcription regulator, containing DNA-binding HTHdomain
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1529704 - 1529928 bp
Length : 225 bp
Strand : +
Note : -

DNA sequence :
ATGGCTTCGGCGAATAAAATTAATAGTAGGGTTCGCGAGTGTCGTTTCTTTGCGAATGAAATGACACAACAAGAATTGGC
TGAACGCGTAGGGGTGACTCGTCAAACTATCATGGCAATAGAAAAAGGAAAATACAGCCCTTCACTTGAAGTCGCATTTA
AAATTGCATTAGTGTTTAATAAACCTTTAGAAGATGTGTTCACTTATGAACCTAATGTTGAATAA

Protein sequence :
MASANKINSRVRECRFFANEMTQQELAERVGVTRQTIMAIEKGKYSPSLEVAFKIALVFNKPLEDVFTYEPNVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-08 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-08 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GNIT_1407 YP_004871519.1 transcription regulator, containing DNA-binding HTHdomain VFG2168 Protein 5e-09 50
GNIT_1407 YP_004871519.1 transcription regulator, containing DNA-binding HTHdomain VFG2175 Protein 5e-09 50