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Name : topB (GNIT_1301) Accession : YP_004871418.1 Strain : Glaciecola nitratireducens FR1064 Genome accession: NC_016041 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 1413443 - 1415359 bp Length : 1917 bp Strand : - Note : - DNA sequence : ATGATCGTGTATATCGCAGAAAAACCTAGCTTGGGTCGGGCAATTGCGACAGGTTTTTCTGGCAAACAACAAAAGCGCGA GGGCTACATCGAGCTGGATAATGGCGATTGCGTAACGTGGTGTGTCGGTCATCTACTAGAACAAGCAGAGCCAGATAAAT ACGATGCTGCGTTTGCCAAATGGTCGCTGCAACATCTACCGATTGTGCCCGACAAGTGGCAGCTTGTGCCGAAAAAGAAC ACACAAAAGCAACTCACCGTGGTTAAACGTCTACTAAAAAAAGCTACGCATATCGTAAATGCGGGCGACCCTGATCGCGA GGGCCAGTTGTTAGTGGATGAAGTGATCACCTATTGCGGGGTAAAAGCCTCAATTATTGAAAATGCCGGACGTTTGTTAA TAAACGACTTAAACACCAGTGCAGTGAAAAAAGCACTTCAAAACATGCGGACTAATCGTGAGTTTTTAGGCTTGTCGATT TCGGCCTTAGCTCGCTCTCGCGCTGATTGGTTATATGGGTTAAATCTGACCCGAGCTTACACTCTGCTAGGACAGCGCGG TGGTTATAGCGGTGTTCTTTCTGTTGGGCGAGTTCAGACCCCAGTTTTAGGTTTGGTAGTAAGGCGCGATCAAGAGATTG CACATTTTGTCTCTAAACCCTTTTATGAAGTCATCGCTTCACTAGAATCACAGAACAAGAAAACCTTTAATGCCAAGTGG CAACCAAGCAAAGCTTGCGAACCATATCAAGACGAAGAAGGTCGAGTGCTGTCACGCAAATTAGCGCAAACGGTAGTGAA TAAAACGCGAGGCCAACAAGCTAAGGTAACTGACTACAAAGTACAGAATAGGCAAAGTCCCCCGCCCTTGCCATTCAGTT TATCTGTATTACAAATTGAGGCGTCAAAGCGCTTTAACTTATCGCCCAAGATGGTGTTAGATGTTTGTCAGTCTCTGTAC GAAAAACACCAATTGATTACTTACCCTAGATCAGATTCTCGCTATTTACCAAAAGACCAGTTTGGGCAGGCTTCAAACGT GTTAGGCGCGATTAAGTCAAATGTGCCAAATTTTGCAAGCGCAGTAGATAACGCTAATCCAAAGTTAAAATCTAAAGCCT GGAATGACAGCAAAGTTGATGCCCACCATGCCATTATTCCGACCAATCGCAGTAAGGCTATAGGCAGCTTTACACAGTAT GAAGGGAAAATTTATCAGCTCATTGCTAATCAATATTTAATGCAGTTTTATGGGCCACATAAATATCAAGAACAAGTGGC TAAGATTGATATTGCGGGCGGTGAATTTGTTGCCAAAGGCAAATCGAGTCAAGACTTAGGCTGGTTAGCACTGACTAAAA ACCAAAATAATGCATCCGACGATAATAAAAACGACACGTTGTTGCCTCAGTTAAACAAAGGAGAGCTTCTGAAATGCACA GACTCTCAGTTGATGGAGAAGCAAACATCACCCCCTAAACATTTTACAGAAGCTACCTTGCTTGCAGCCATGACCGGTAT TTCTCGTTATGTTCAGGATCGCAACATTAAGCTTATATTAAAAGAGACTGATGGGCTGGGCACAGAGGCAACCCGAGCAA CAATTATTGATTTGCTATTTAAACGTCAGTTTATGCAAAAAGTAGGCAAAGAGGTCCATGCAACCGAAACAGGTAAAGCC CTTATTAACGCTTTACCTAGTGAAACTACTTATCCTGACATGACCGCAACTTGGGAGGCAGACTTAGATAAAATAGCCCA ACGACAACTACGTTATGACGGCTTTATGCAACCTTTAACAGAGTCTATTGCGCGGCTTATTGACAACAGTCAACAGTTAG ATTCAAGACAGTTTGCGGGTTTGAAGAGTTCGAAGCCAACGCGCAAGAAGCGTTACTTTAAGAAAAAGTCTTCTTAA Protein sequence : MIVYIAEKPSLGRAIATGFSGKQQKREGYIELDNGDCVTWCVGHLLEQAEPDKYDAAFAKWSLQHLPIVPDKWQLVPKKN TQKQLTVVKRLLKKATHIVNAGDPDREGQLLVDEVITYCGVKASIIENAGRLLINDLNTSAVKKALQNMRTNREFLGLSI SALARSRADWLYGLNLTRAYTLLGQRGGYSGVLSVGRVQTPVLGLVVRRDQEIAHFVSKPFYEVIASLESQNKKTFNAKW QPSKACEPYQDEEGRVLSRKLAQTVVNKTRGQQAKVTDYKVQNRQSPPPLPFSLSVLQIEASKRFNLSPKMVLDVCQSLY EKHQLITYPRSDSRYLPKDQFGQASNVLGAIKSNVPNFASAVDNANPKLKSKAWNDSKVDAHHAIIPTNRSKAIGSFTQY EGKIYQLIANQYLMQFYGPHKYQEQVAKIDIAGGEFVAKGKSSQDLGWLALTKNQNNASDDNKNDTLLPQLNKGELLKCT DSQLMEKQTSPPKHFTEATLLAAMTGISRYVQDRNIKLILKETDGLGTEATRATIIDLLFKRQFMQKVGKEVHATETGKA LINALPSETTYPDMTATWEADLDKIAQRQLRYDGFMQPLTESIARLIDNSQQLDSRQFAGLKSSKPTRKKRYFKKKSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 6e-107 | 41 |
