Gene Information

Name : lspA (GNIT_1062)
Accession : YP_004871187.1
Strain : Glaciecola nitratireducens FR1064
Genome accession: NC_016041
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 1160407 - 1160907 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGCTTAATGTCTTTAAAAATACGGGATTGCGATTTACTTGGATCTCCATTATTGCGGTGGTCTTAGACCAGTGGAGCAA
GCAAGCGGTTGTTCAATCTATGGCGCTTTACGAGTCAATTGAAATTGTACCGTTTTTTAATTTTACCTACGTACATAATT
ACGGTGCTGCGTTTAGCATTCTTTATGATGCTGGCGGCTGGCAGCGTTATTTTCTCAGTGCAATTGCACTAGGTGTTAGT
GGCTTGATAGTGTGGTGGTTGAAAAGTACAACTCGCGATCAAATTTTGCTTCCTGTCGCTTTTTCATTCATTTTAGGTGG
CGCATTGGGCAATGTCTATGATCGTGTTATGCATGGTTATGTGATTGATTTTCTTGATTTTTACTATGGTACTTCACATT
GGCCAGCGTTTAACATTGCAGATTCTGCAATATTTTTAGGCGCTGTCTTACTTATCATCGATATGTTTATTAACAAAGAG
GCAAATGACGTTGACAAATAA

Protein sequence : 
MLNVFKNTGLRFTWISIIAVVLDQWSKQAVVQSMALYESIEIVPFFNFTYVHNYGAAFSILYDAGGWQRYFLSAIALGVS
GLIVWWLKSTTRDQILLPVAFSFILGGALGNVYDRVMHGYVIDFLDFYYGTSHWPAFNIADSAIFLGAVLLIIDMFINKE
ANDVDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-16 52
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-16 52
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-16 52
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 9e-19 50
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 9e-19 50
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-18 50
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-18 50
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 9e-19 50
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 3e-19 48