Gene Information

Name : GLX_31490 (GLX_31490)
Accession : YP_004869602.1
Strain :
Genome accession: NC_016028
Putative virulence/resistance : Resistance
Product : dihydrolipoamide dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : -
Position : 5607 - 7037 bp
Length : 1431 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGACTGCTGCACCACCGAAGGAAGCCGTAAGGGCGGCTACGACCTTGCCGTCATCGGCGCCGGATCGGCCGGATT
CTCGGCCGCGATCACCGCCGCCGATCAGGGCGCCAATGTCGCGCTGATCGGCCACGGCACCATCGGCGGCACCTGCGTCA
ATGTCGGCTGCGTGCCGTCGAAGACGATGATCCGCGCGGCCGAGGCGCTGCATGGTGTGCGGGCCGCGCAACGCTTTCCC
GGCCTGGTCGGGGAAGCAAGCGTGGCCAACTGGCCCGCGCTCGTCGCGGCCAAGGACGAGCTGGTCACCAGCTTGCGGCA
GAAGAAATATATTGACCTGCTGCCCGAGTACAACGGCGTTGCCTATCTGGAAGGCGCGGCGCGTCTGAACGGGCAGGGCG
TGATGGTGAATGGCGCCGCGATTTCAGCGGGCAAGATCATCATCGCGACCGGCTCCTCGCCGGCCCTGCCGGACATTCCC
GGCATTGAGGAGGTGCCTTATCTCACCAGCACGACTGCCCTGGAACTTGGCGCGCTACCGCGCTCATTGCTCGTCATCGG
CGGCGGCTATATCGGCTGCGAACTGGCGCAGATGTTCGCGCGCTTCGGCGTGGCGGTGACGCTCATCACCCGCCGCCGCT
TGCTGCCGGAGGCCGAGCCGGAAATCTCCGAGGCGCTGACCGGCTATCTCCGCGACGAGGGCATTACCGTCCGGACCGGA
CTAACTTATCGCGGAATCGCGCGCACGGCTGCCGGCGTCGAGCTGAGTATCACCACCGACGGCGCACAGCAGGTGATCGC
CGCCGAGCAGGTGCTCGTAGCCACCGGACGGGCGCCGAATACCGATGGCCTCGGCCTTGTCGAAGCGGGCATCGCCCAAG
CCGACAACGGCAGTGTGGTCGTGGACGACCGGATGCGCACCTCGAGACCGGATGTCTATGCGGCCGGCGACGTCACCGGT
CGCGATCAGTTTGTCTATATGGCGGCCTATGGCGCGAAGCTCGCCGCGCACAACGCGCTGAACGGCGACGACCTCGTCTA
CGACAATACGGTCATGCCCTGGGTCACGTTTACCGACCCACAGGTGGCGGGCGTGGGACTGAGCGAAAGGGCAGCGCAGG
CAGCGGGCTTCGAGACCAAGACCTCGATCGTCGCCCTCGACCAGGTGCCGCGGGCACTGGCCGCTCGCGACACACGGGGG
TTGATCAAGCTGGTCGCTGACAAAACGTCCGATCGCCTGCTGGGCGGTCAAATCGTCGCGCCCGAGGGAGCCGACAGCAT
CCAGACCATGGTGCTCGCGATCAAACACGGCATGACGACGAAGGCGCTGGGCGAGACGATCTTTCCCTATCTCACCACGG
TCGAGGGCCTGAAACTCGCCGCACAGGGCTTCGGCAAGGATGTGGCAAAACTGTCCTGCTGCGCAGGATGA

Protein sequence :
MSDCCTTEGSRKGGYDLAVIGAGSAGFSAAITAADQGANVALIGHGTIGGTCVNVGCVPSKTMIRAAEALHGVRAAQRFP
GLVGEASVANWPALVAAKDELVTSLRQKKYIDLLPEYNGVAYLEGAARLNGQGVMVNGAAISAGKIIIATGSSPALPDIP
GIEEVPYLTSTTALELGALPRSLLVIGGGYIGCELAQMFARFGVAVTLITRRRLLPEAEPEISEALTGYLRDEGITVRTG
LTYRGIARTAAGVELSITTDGAQQVIAAEQVLVATGRAPNTDGLGLVEAGIAQADNGSVVVDDRMRTSRPDVYAAGDVTG
RDQFVYMAAYGAKLAAHNALNGDDLVYDNTVMPWVTFTDPQVAGVGLSERAAQAAGFETKTSIVALDQVPRALAARDTRG
LIKLVADKTSDRLLGGQIVAPEGADSIQTMVLAIKHGMTTKALGETIFPYLTTVEGLKLAAQGFGKDVAKLSCCAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
merA AAN62178.1 mercuric (Hg(II)) reductase Not tested PAGI-2(C) Protein 2e-80 49
SE0085 NP_763640.1 dihydrolipoamide dehydrogenase Not tested SCCpbp4 Protein 2e-94 48
merA BAB47642.1 mercuric reductase Not tested Type-III SCCmec Protein 1e-94 48
merA AGK07079.1 MerA Not tested SGI1 Protein 2e-78 47
merA ABQ57371.1 MerA Not tested SGI1 Protein 2e-78 47
merA AGK07021.1 MerA Not tested SGI1 Protein 2e-78 47
merA ACN81005.1 MerA Hg(II) mercuric ion reductase Not tested AbaR5 Protein 3e-78 47
merA CAJ77060.1 Mercuric ion reductase Not tested AbaR1 Protein 5e-78 47
merA AET25397.1 MerA Not tested PAGI-2(C) Protein 1e-77 46
merA AFG30120.1 MerA Not tested PAGI-2 Protein 1e-77 46
merA YP_006098387.1 mercuric ion reductase Not tested Tn2411 Protein 2e-77 46
unnamed ABR13401.1 mercuric reductase Not tested PAGI-5 Protein 5e-77 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GLX_31490 YP_004869602.1 dihydrolipoamide dehydrogenase BAC0651 Protein 8e-95 48
GLX_31490 YP_004869602.1 dihydrolipoamide dehydrogenase BAC0653 Protein 1e-79 47
GLX_31490 YP_004869602.1 dihydrolipoamide dehydrogenase BAC0652 Protein 2e-78 47
GLX_31490 YP_004869602.1 dihydrolipoamide dehydrogenase BAC0650 Protein 7e-75 45