Gene Information

Name : GLX_31590 (GLX_31590)
Accession : YP_004869612.1
Strain :
Genome accession: NC_016028
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 15219 - 16064 bp
Length : 846 bp
Strand : -
Note : -

DNA sequence :
ATGATGTCTGTCACCGAACGCATCCGACAAAGCCTGCTGGCTCTCCATATGGCACGCGCCCTCGAAACGCTTGATCACAC
GCTGGGCAGGCTGGAAAAGGGCGAGATCAGCGCCATCGAGGCCATCGACGATCTGCTGGCCGAAGAACTGAACCTGCGCG
AGGGACGGCGCATCAGCGTAGCACTGCGCACCGCCCGCCTCATGCCGATCAAAACTATCGAGAGCTTCGACTTCTCGTTC
CAGCCTTCACTCGACAGGCATCGCATCACCGCGCTGGCCCAGCTCGAGTTCATCAATCGGGCCGAGGTGTTGCATTTTCT
GGGCCCGCCAGGCACCGGAAAATCCCATCTGGCCACAGCCATCGGCGTGGCCGCCGTCAGGGCCGGACGCAGCGTCTATC
GCTGCTCTCTGGCAGAACTGCTCGAGGCGCTCACCAGAGCCGAACGCGAGGGGCGTCTGGCCGAGAAAATTCGCTTCTAC
ACGCGGGCTTCGCTGCTGATCGTCGATGAAATTGGCTACCTGCCAATCACGCCAGGTGGTGCCAACCTCTTCTTCCAGCT
GGTCAATGCCCGCTACGAAAAGGGAGCGATGATCCTGACCTCCAATCGCGGTTTTGCCGAGTGGGGCGAGGTCTTCGGCG
ACCCGGTCGTCGCCACCGCGCTGCTCGACCGGCTACTTCACCATGCTGTCGTCGTCCACATCGAAGGTGCCAGCTATCGC
CTGCGCCAGCATGCCGATCTGATCCCCGAGCATACACGGGCCCACGCCAATCTGATGCCACCGGCAGCGCCAAAGCGCCG
CGGTAGGCCCCCAAAGCATGGAGCTATCGATCACCTCAATGGCTGA

Protein sequence :
MMSVTERIRQSLLALHMARALETLDHTLGRLEKGEISAIEAIDDLLAEELNLREGRRISVALRTARLMPIKTIESFDFSF
QPSLDRHRITALAQLEFINRAEVLHFLGPPGTGKSHLATAIGVAAVRAGRSVYRCSLAELLEALTRAEREGRLAEKIRFY
TRASLLIVDEIGYLPITPGGANLFFQLVNARYEKGAMILTSNRGFAEWGEVFGDPVVATALLDRLLHHAVVVHIEGASYR
LRQHADLIPEHTRAHANLMPPAAPKRRGRPPKHGAIDHLNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-35 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-35 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-35 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-35 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-35 41
unnamed CAA21402.1 - Not tested HPI Protein 1e-35 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-35 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-35 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-35 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-35 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GLX_31590 YP_004869612.1 transposase VFG1627 Protein 6e-36 41
GLX_31590 YP_004869612.1 transposase VFG1606 Protein 6e-36 41
GLX_31590 YP_004869612.1 transposase VFG1663 Protein 8e-36 41
GLX_31590 YP_004869612.1 transposase VFG1515 Protein 6e-36 41