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Name : GLX_22380 (GLX_22380) Accession : YP_004869020.1 Strain : Gluconacetobacter xylinus NBRC 3288 Genome accession: NC_016027 Putative virulence/resistance : Unknown Product : type I/III endonuclease restriction R subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 2469583 - 2472726 bp Length : 3144 bp Strand : + Note : - DNA sequence : GTGACAGACCTCCCACGTCCCGGTTCAGGCGCGTCACATTCCGTCCGTGAGGAAGCGGTAGAACTGGCGGCGTTGTCGTG GTTCGATCTGGTCGGTTGGCGCACGCTGCCAGGCGACCATCTTGCGCCTGACGGACCGATCGGCGCACGGCGCGATTATC GTCAGTGCGTGCTGGAGCCGGAACTCAGGAGCGCCCTGGCAACGCTCAATCCTGATGCGACGGCCGCCATGGTTGATACG GCGGTTCAGGCCGTGCTCAGTGTGCCAAGTCAGGAACTCAAGGAGAATAACCGAGCATTTCACACGATGCTCGCGTCCGG CGTGCCTGTCGAGATCGTCGAGAATGGCGAGACGCGGACGGTTGGCTTGCGCTTGTTCGACCGTCAGAATCTGTCCGCCA ATCGCTGGCTCGTCGCCAACCAGTTTGTCGTGCAGGGCGAGCGCGAGATCATCCGCCCCGACGTCACGGCTTTCGTCAAC GGACTGCCGTTGGCAGTGCTGGAACTGAAGAGTCCGGTGCATGAACATGCGACGCTAGAGAGCGCTTGGCACCAGCTTCA GAATTACAAGGCGAAAGCCCCCGAGCTACTCCGCACCAACCAGGTGCTCGTCATCAGCGATGGTCTGGACGCACGCATTG GCTCGCTCACGGCTGGGCTGGACCGGTTCGGCCCATGGCGCACGATTGAAGGCGATACGCTTGATGACGGGAGTCGGCCT GAACTGGAAGTGCTGATCCGTGGCGTGTTCGCGCCCGAGCGCTTTCTCGACTTCATAGTCGATTTCGTGGCCTTCGAGGT GGTCGACGGTGTGGTGAAATCGAAGAAGCTTGCCGGCTATCATCAGTTTCATGCCGTCCGGAAGGCGTTGGTATCGACCG AGCACGCTGCGGCTGAGGGCGGTGGACGGCGCGGCGGCGTGATTTGGCACACGCAGGGCTCGGGCAAATCGCTCACCATG CTGTTTTTCGTGCGTCAACTTCAGCTTGCTAAGCCGCTGCGTAATCCGACCGTGGTGATTGTGACTGATCGCAACGATCT GGACGATCAGCTTTTCGGTATCTTCAATCACCATATTTCGGCGCTGCGCGGGACGCCTCGTCAGGCGAATAGCGCCGCCG AAATGCGCCAGCTTCTTGCTGTCGACATCGGCGGCCTAGTTTTCACGGGCATTCAAAAGTTCCGAGGAGACGAGGACGGT CACCCCCTGTTGACGGACCGCCGGAATGTCATCGTCATCGCCGACGAGGCGCACCGGTCGCAATATGGCCTTCGCAAGCG TTTCGTGGTGGACCGGAACGGCGTGCGCGAGACGGTCGGGTTCGCCGAGTATCTCCGTCAGGCGCTCCCAAATGCGACTT TCGTCGGTTTCACCGGCACTCCTATCGAGGAGAAGGATCGCAACACGCAGGCTGTGTTTGGCGACGTGATCGATACTTAC GATATGACCCAAGCTGTGACCGACAAGGCAACAGTGCCTATTCATTACACTGCGCGGCTCGCCAAACTACGGTTGGAACT CAGCGAAAATGAACGTGAGGAGTTGGACGCGCTGGCGGAGGAGTTGTCTGAGGGTGACGAAGCAGCGGTTGAGCACGAGA AGGGGAAGTTAGGTCGCTTCGAAGAGGTAGTCGGTGCACCTGACCGAATTCATGAAGTCGCACGCGATATTGTCGCCCAT TTTGAAGCGCGTCGCGAAGCGCTAGGTGGCGGCAAGGGCATGATTGTCACGATCAGTCGGCGTGTAGCCGTAGAGTTGTA CAATCGGATTGCGGTGCTTCGCCCGGACTGGGTGTCTGCGGACCCTCGCGATGACGCCACCGGAATGCTCAAGGTAGTTA TCACCGGTAAGGGGAATACCGACCCAGAACTGTTGCAACCGCACCTAAGAAGCAAGAGGCAGCGCGAAGAACTCGCTGAA CGATTTAAGAATCCCACATCGGGCTTCGACCTCGTTATCGTGCGGGATATGTGGTTGACGGGATTCGACGCACCGTCGCT TCATACCCTCTATATCGACAAGCCTATGCGTGGGCACGGACTTATGCAGGCGATTGCGCGTGTGAATCGGGTCTGGGGCG ATAAGCCAGGTGGATTAGTGGTCGATTATCTTGGAGTCGGAACCGAGTTGCGCGAGGCGCTTGCGCAATACACAGAACGT GACCGTGATCAGGTGAGGCCCGATCTGGACGAGGCTGTCCGTCAAACTCTTTTGCGACTTGAAAGTGCAGAAACTTTACT GGAGGGGGTTGCCTGGAGGCGTTTCTTTAATGCCTCTCCTGGCGAGCGTCTCACAGTTCTGAAGCAGTGTCTGGAACATT TGCTGTCCACGCAGCAGCGTGACCGTTTCGTCGAGACCAGTCTTGAAATGGAGATCGCTTATGCGATCAGTGCCGGTGAC GAACGAGTAGCCGTGCGACGTGACGAGATTGCGATCATGGCCGCGATTCGGACAAATCTCGTCAAATACACCAAAGGCGG TGTCCGCAGCCGTTTCGACATTGAGCGCGACATTCGACAACTCCTTTCGCGAGCTGTCATGTCAGATGGCATACTTGACG TCTTCCAGTCTGCTGGTCTGGAGAGGCCAGACCTTTCTATCTTGTCCGACGAGTTCCTCGCCGAGGCGCGCTCCAGTCGT CAACCGAGTTTAGCGGTTGAAACGCTTCGTCGGCTACTGGAAGGGGAGATTAAGGCGCGGACCAGTTCCAATCTGGTCGA AGCACGGAAGCTCACCGACCGCCTCGATGAGACGCTACGTCGTTATCATAATCGAGCGGTTGACAGTCTGCAAGTTATCG AAGAATTGATTGCGCTCGCCAAAGAGTTGAGTGCAGCAAAGAGCCGAGGAGAGGAACTTGCTCTTTCCGAAGAAGAGCTC GCCTTCTATGATGCGCTCGCCGAAAATGGATCGGCTCGTGATCTGATGGCGCACGATGCATTGCGCACTTTGGCACAGAT TCTCACGGCTACTATTCGCTCTTCGGTTTCGATCGACTGGACGCGCAAGGAGAGCGTACGGGCTAAGATGCGGATCGAGG TTCGCAAGCTACTTGCCCGTTATGGTTATCCGCCCGACTTGCAGCGGGCGGCGGTGGATCTGGTCATCAAGCAAGCTGAA TTGATTGCGGGAAGTTGGCGATAG Protein sequence : MTDLPRPGSGASHSVREEAVELAALSWFDLVGWRTLPGDHLAPDGPIGARRDYRQCVLEPELRSALATLNPDATAAMVDT AVQAVLSVPSQELKENNRAFHTMLASGVPVEIVENGETRTVGLRLFDRQNLSANRWLVANQFVVQGEREIIRPDVTAFVN GLPLAVLELKSPVHEHATLESAWHQLQNYKAKAPELLRTNQVLVISDGLDARIGSLTAGLDRFGPWRTIEGDTLDDGSRP ELEVLIRGVFAPERFLDFIVDFVAFEVVDGVVKSKKLAGYHQFHAVRKALVSTEHAAAEGGGRRGGVIWHTQGSGKSLTM LFFVRQLQLAKPLRNPTVVIVTDRNDLDDQLFGIFNHHISALRGTPRQANSAAEMRQLLAVDIGGLVFTGIQKFRGDEDG HPLLTDRRNVIVIADEAHRSQYGLRKRFVVDRNGVRETVGFAEYLRQALPNATFVGFTGTPIEEKDRNTQAVFGDVIDTY DMTQAVTDKATVPIHYTARLAKLRLELSENEREELDALAEELSEGDEAAVEHEKGKLGRFEEVVGAPDRIHEVARDIVAH FEARREALGGGKGMIVTISRRVAVELYNRIAVLRPDWVSADPRDDATGMLKVVITGKGNTDPELLQPHLRSKRQREELAE RFKNPTSGFDLVIVRDMWLTGFDAPSLHTLYIDKPMRGHGLMQAIARVNRVWGDKPGGLVVDYLGVGTELREALAQYTER DRDQVRPDLDEAVRQTLLRLESAETLLEGVAWRRFFNASPGERLTVLKQCLEHLLSTQQRDRFVETSLEMEIAYAISAGD ERVAVRRDEIAIMAAIRTNLVKYTKGGVRSRFDIERDIRQLLSRAVMSDGILDVFQSAGLERPDLSILSDEFLAEARSSR QPSLAVETLRRLLEGEIKARTSSNLVEARKLTDRLDETLRRYHNRAVDSLQVIEELIALAKELSAAKSRGEELALSEEEL AFYDALAENGSARDLMAHDALRTLAQILTATIRSSVSIDWTRKESVRAKMRIEVRKLLARYGYPPDLQRAAVDLVIKQAE LIAGSWR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 43 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 43 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 43 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 43 |
