Gene Information

Name : GLX_20090 (GLX_20090)
Accession : YP_004868791.1
Strain : Gluconacetobacter xylinus NBRC 3288
Genome accession: NC_016027
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2236365 - 2238206 bp
Length : 1842 bp
Strand : -
Note : -

DNA sequence :
ATGACCACCGTTGCTTCGCCTTCATCTCCCGACCATGTCACAACCGGCCCCATCATGGGGTCTGCCAAGGTCTGGTCCGC
GCCCGAAGGGCATGCGCATATCCGCGTGCCGTTCCGCGAAATAGTACTTGAACCCAGCGCGAACGAACCGCCCGTGCGGG
TGTACGACACCTCCGGCCCGTATACCGACCCGGCCGCGCGGATCGACGTGCGCGCGGGACTGGAACCGATCCGCGCCCCG
TGGATCGCGGCACGCAACCTGCCCACCGTCACGCCACGCGCCGTACGACCCGAGGACAATGGCTTTGCCAGGGGCGAAAA
CCTTGTCCCCGCCTGTCCTGCCCCCCACCGCGTGCATGAAGGCCAGCCGGGGCAGATGGTTACGCAGTATGAGTTCGCGC
GTGCGGGCATCATTACCGAAGAAATGATCTACGCCGCCCACCGCGAAAACCTTGGCCGCACCACGATGGTCGAGGGCGCC
GCCACCCGTCGCGCCGATGGCGAGGATTTTGGCGCTGACATACCCGAATTCGTGACCCCCGAATTCGTACGCGCCGAAAT
TGCGGCGGGCCGCGCCATCCTGCCCGCCAACATCAACCACCCCGAACTTGAGCCCATGGTGATCGGGCGCAACTTCCTTG
TGAAGGTGAATGCCAATATCGGCAATTCGGCCGTGACCTCATCGGTGGCGGAAGAGGTGGAAAAGATGGTGTGGTCCATC
CGCTGGGGTGCCGACACGGTCATGGACCTGTCCACCGGGCGCAACATCCACAACATCCGCGACTGGATCCTGCGCAACGC
GCCAGTGCCCATCGGCACGGTGCCGCTGTACCAGGCGCTGGAAAAAGTGGGCGGCGTGCCCGAGGACCTGACATGGGAGA
TCTTCCGCGACACGCTGATCGAGCAGGCGGAACAGGGCGTGGACTATTTCACCATCCACGCTGGCGTGCGGCTGCGGCAT
GTGCCGCTTACGGTCAACCGGGTAACGGGCATCGTCTCGCGCGGCGGGTCGATCATGGCGGGATGGTGCCTGCACCACCA
CCGCGAGAGCTTCCTGTATGAGCATTTCGGGGAGATATGCGACATCATGCGCCGTTATGATGTTTCGTTCTCGCTTGGTG
ACGGCCTGCGTCCCGGTTCCATCGCCGATGCGAATGACGCCGCCCAGTTCGCCGAACTGGAAACGCTGGGTGAACTGACA
AAAATTGCGTGGGCCAAGGGCTGTCAGGTCATGATCGAAGGGCCGGGCCATGTGCCCATGCACAAGATCAAGGTCAATGT
GGAAAAGCAGCTGCGTGAATGTGGCGAAGCGCCGTTCTACACACTTGGTCCGCTTACGACGGACATTGCACCGGGCTATG
ACCACATTACATCCGGCATCGGTGCCGCCATGATCGGGTGGTTCGGCACGGCCATGCTGTGTTACGTCACGCCGAAGGAG
CATCTCGGCCTGCCCGACCGCAACGACGTAAAAGTGGGTGTGGTGACCTACCGCATTGCCGCCCATGCGGCCGACCTGGC
CAAGGGGCACCCGGCGGCACGCATCCGTGACGATGCGATCAGCCGCGCGCGCTTCGACTTCCGCTGGAATGACCAGTTCA
AGCTGTCGCTCGACCCGGATACGGCATGTTCGTACCATGATGAGACGCTGCCGCGCGAAGCACACAAGAACGCACATTTC
TGTTCCATGTGCGGCCCCAAATTCTGTTCCATGCGCATAAGCCATGACCTGAAGGCCGATGCGCAGCGCCTTGCAGGGCT
GGAGCAGAAAAAGGAAGAGTTCCGCAGCAACGGCAACCGGATCTATGTGCCAGTGGATGAGGCCGTGACATCGGCAGAAT
AA

Protein sequence :
MTTVASPSSPDHVTTGPIMGSAKVWSAPEGHAHIRVPFREIVLEPSANEPPVRVYDTSGPYTDPAARIDVRAGLEPIRAP
WIAARNLPTVTPRAVRPEDNGFARGENLVPACPAPHRVHEGQPGQMVTQYEFARAGIITEEMIYAAHRENLGRTTMVEGA
ATRRADGEDFGADIPEFVTPEFVRAEIAAGRAILPANINHPELEPMVIGRNFLVKVNANIGNSAVTSSVAEEVEKMVWSI
RWGADTVMDLSTGRNIHNIRDWILRNAPVPIGTVPLYQALEKVGGVPEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLRH
VPLTVNRVTGIVSRGGSIMAGWCLHHHRESFLYEHFGEICDIMRRYDVSFSLGDGLRPGSIADANDAAQFAELETLGELT
KIAWAKGCQVMIEGPGHVPMHKIKVNVEKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKE
HLGLPDRNDVKVGVVTYRIAAHAADLAKGHPAARIRDDAISRARFDFRWNDQFKLSLDPDTACSYHDETLPREAHKNAHF
CSMCGPKFCSMRISHDLKADAQRLAGLEQKKEEFRSNGNRIYVPVDEAVTSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-179 64
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-179 64
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 9e-176 63