Gene Information

Name : GLX_18780 (GLX_18780)
Accession : YP_004868660.1
Strain : Gluconacetobacter xylinus NBRC 3288
Genome accession: NC_016027
Putative virulence/resistance : Virulence
Product : O-antigen ABC transporter ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 2093035 - 2093682 bp
Length : 648 bp
Strand : -
Note : -

DNA sequence : 
ATGTTGCGCTGTATAGATATTGTAAAAGATTATCATGTAGACAAAGGCATGCGTCGAATTCTTGACCGTGTCAGCTTCCA
GGTCGAACGCGGTGAGAAGCTGGGTATTCTAGGACGGAATGGTGCCGGCAAGTCAACATTGATTAAGATTGTTGGCGGTG
TAGAACTGGCAACATCCGGACGTATTGAAAGAAATATGTCCGTTTCATGGCCCTTAGCATTTGGTGGTGCTTTCCAAGGA
AGCTTGAGCGGCTTGGATAATCTTCTTTTTATCTGTCGTATTTATAATCTGGATTATAAAAAAACGCGTAAATATGTAGA
TGATTTTGCTGAATTGGGAAAACAGCTTCTCGACCCCGTTAAAACTTACTCCTCTGGTATGCGGGCACGACTTGCCTTTG
CTCTATCTGTTGTAATCGAGTTTGATTGTTACCTTATCGATGAAGTCATTATGGTGGGCGATGCCCGATTTTATGAACGC
TGTCGAGAAGAATTATTTATAAAGCGCGCAGACCGCGCATTGATTATTGTCTCTCATGATATGAATTTTATTAAGGAAAT
TTGTGACAGAAGCGCGGTAATACATAATAGAAAGATGATAGAGTGCAGTAGTGTTCAAGAAGGAATAGATTTATATCACT
CCCTATGA

Protein sequence : 
MLRCIDIVKDYHVDKGMRRILDRVSFQVERGEKLGILGRNGAGKSTLIKIVGGVELATSGRIERNMSVSWPLAFGGAFQG
SLSGLDNLLFICRIYNLDYKKTRKYVDDFAELGKQLLDPVKTYSSGMRARLAFALSVVIEFDCYLIDEVIMVGDARFYER
CREELFIKRADRALIIVSHDMNFIKEICDRSAVIHNRKMIECSSVQEGIDLYHSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 6e-57 55
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GLX_18780 YP_004868660.1 O-antigen ABC transporter ATP-binding protein VFG0258 Protein 2e-57 55
GLX_18780 YP_004868660.1 O-antigen ABC transporter ATP-binding protein VFG0696 Protein 3e-57 55
GLX_18780 YP_004868660.1 O-antigen ABC transporter ATP-binding protein VFG2563 Protein 6e-57 54
GLX_18780 YP_004868660.1 O-antigen ABC transporter ATP-binding protein VFG1449 Protein 3e-35 42