Gene Information

Name : GLX_18560 (GLX_18560)
Accession : YP_004868638.1
Strain : Gluconacetobacter xylinus NBRC 3288
Genome accession: NC_016027
Putative virulence/resistance : Resistance
Product : acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 2075937 - 2076536 bp
Length : 600 bp
Strand : +
Note : -

DNA sequence : 
ATGTATTACGGTAAGAATATCTTTGATCTACTTTTATGTTACACTCGAGCTTATGAGATCGAGAAATGGGGCTGGGAAAT
CGGAGAACATACATACGGTGCTCCAGGCTCTCCCATTGTCATAGAGACCGAATTTGCAAACCTTAAAATAGGAAAATATT
GTTCAATCGCACGTGAAGTACTCATGATTTTGGGCAACCATCGTGTAGATACGGTTACAACCTATCCTTTTAAGGCCCTG
TGCGGTTTCTGGCCCGAATCGGTGGATTCAACAGACGACCACTCAACAAAAGGGGATATCGTTATTGGCAATGATGTATG
GATCGGCGCGCGGGCCAATATTATGTCCGGTGTGACTATTGGAACAGGCGCCGTTATCGCTACTGCTGCTGTAGTAACTA
AGGACGTTCCCCCTTATGCCATTGTAGGTGGCAATCCGGCGCGAATCATCAAATATCGCTTTTCCGAAAAAATCATTGAG
CGATTATTAGCGGTCGCTTGGTGGGACTGGCCTGATGAAATGATACGCGAACGCATGAAGTTATTGATGAGTGATGATAT
CGAGAACTTTTTGCAGGCATTTGAGAAGTTATCAAAATAG

Protein sequence : 
MYYGKNIFDLLLCYTRAYEIEKWGWEIGEHTYGAPGSPIVIETEFANLKIGKYCSIAREVLMILGNHRVDTVTTYPFKAL
CGFWPESVDSTDDHSTKGDIVIGNDVWIGARANIMSGVTIGTGAVIATAAVVTKDVPPYAIVGGNPARIIKYRFSEKIIE
RLLAVAWWDWPDEMIRERMKLLMSDDIENFLQAFEKLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 2e-16 44
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 2e-16 44
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-16 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GLX_18560 YP_004868638.1 acetyltransferase AM180355.1.gene2499. Protein 7e-23 49
GLX_18560 YP_004868638.1 acetyltransferase AF322577.2.gene4.p01 Protein 7e-17 44
GLX_18560 YP_004868638.1 acetyltransferase AY740681.1.gene5.p01 Protein 7e-17 44
GLX_18560 YP_004868638.1 acetyltransferase AY123251.gene2.p01 Protein 3e-17 44
GLX_18560 YP_004868638.1 acetyltransferase NC_002516.2.878374.p Protein 3e-18 44
GLX_18560 YP_004868638.1 acetyltransferase JF268688.1.gene6.p01 Protein 1e-19 43
GLX_18560 YP_004868638.1 acetyltransferase CP001581.1.gene990.p Protein 3e-20 41