Gene Information

Name : GLX_16750 (GLX_16750)
Accession : YP_004868457.1
Strain : Gluconacetobacter xylinus NBRC 3288
Genome accession: NC_016027
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1876213 - 1877823 bp
Length : 1611 bp
Strand : -
Note : -

DNA sequence :
ATGACGTCTGCACCTGCGGTCCTGCCTGATGATCCGGATACCCTGAGGGAAATGATTGTTTCCCTGCAGACCGAAGTGGC
TCGGCTTTCTGCGTCAGCCCGTGCGTATGAAGCTCTTGTCCAGTCTCTCAAAATCCGGATCGCACGTCTTCAGAAACAGA
AATTCGGGGCCAGTTCAGAAAAGATAGACCGTGAGATTGAACAACTCGAACTGCTCCTTGAAGATGTAAAAATCGCCATC
GCGGCAGCCGATCCTTCTCCTGATATCAGGGAGCATGATGTCAGCGATGATGCACTCTCTCCCCCACGGCAGCGTGGCAA
ACCAAAGGTTTCTGACACGACACCACGGGAGCGTATTGTTCTCGACCCAGGTGAGGCCTGTCCTGCCTGTGGCGGTCCCC
TGCGTCTTGTAGGCGAAGATGTCACCGAAATACTGGACTTTATTGCGGCAAAACTGAAAGTTGTCGAAACGGCACGGCTG
AAGAAATCCTGCCGTCACTGCGAAACACTGGTGCAGCCTGAAGCACCGTCGCGCCCTGTCCCACGGGGGATGGCTGGCAC
CGGGCTTTTAGCCCATATCCTGGTCTCGAAATTCGATGACCACATTCCGCTTTATCGTCAGAATGAGATCTTTGCCCGTC
AGGGTGTGGACATTCCCCGTTCAACCCTGATCGACTGGTGTGGTCAGGCCGTTGCCGTTCTGCGTCCTCTGACAGATCTG
ATCCGTCAGGATGTCGTAAAGGCAGACCTGCTACATGCTGATGATACACCCATCCAGGTTCTTGACCCCCGTCTGCGTCA
GGCTGGCAAACCCCGGGGCGTGAAGGAAGGGCGGATCTGGAGCTATCTGCGCGATCCCCGCCCATGGGGAGGGAGTGATC
CGCCCGCCGTGGCCTACTGGTTCTCTCCCGATCGCAAGGGGATCAATCCCCAGACCCATCTGGCACAGTTCCGGGGCATT
CTGCAGGCTGACGCCTACGCCGGGTTCAGGGATCTGTATAAACCAGACGCAACAGGAACCGTGCACGTGCGCGAAGCGGC
CTGCTGGGCTCATCTCCGCCGGGCCTTCCATGATGTCTGGAAGGGCAGTGATTCGACAATCGCAAGGGAAGCACTTGAAC
AGATCGGAGAGCTCTACGATATCGAGCGCCAGATCACCGGACACCCGGCCCCGTATCGTCTGGCTGTCCGACAGGAACAA
AGCCGCCCCCGTGTCACAGCATTCCACGCATGGTGCGAAACACAGCTTGCCCGTATCCCTGGAAAGGGGGAACTGGCAAA
AGCGATCCGTTATGCGCTCAACCGGTGGAAGGCCTTTACCCTGTTCCTCGAAGATGGTCGTGTCGCCATCGACAACAATC
CTGCCGAACGCGCCATACGGCCCGTATGCGTGGGGCGAAAAAATTATCTCTTTGCCGGATCCGACACCGGGGGCGACAAC
ATCGCTGATGCCATGACGCTTATCGAAAGCGCAAAACTCTCCCGGCTTAATCCGCACGATTACCTCGCCGACGTCCTGGC
CCGTATCAACGAGCACAAGATCAACCGGCTCCACGAACTGTTGCCATGGAACTGGAAACCCGTGAATACACTGCACAGAC
AGGCCGCATAA

Protein sequence :
MTSAPAVLPDDPDTLREMIVSLQTEVARLSASARAYEALVQSLKIRIARLQKQKFGASSEKIDREIEQLELLLEDVKIAI
AAADPSPDIREHDVSDDALSPPRQRGKPKVSDTTPRERIVLDPGEACPACGGPLRLVGEDVTEILDFIAAKLKVVETARL
KKSCRHCETLVQPEAPSRPVPRGMAGTGLLAHILVSKFDDHIPLYRQNEIFARQGVDIPRSTLIDWCGQAVAVLRPLTDL
IRQDVVKADLLHADDTPIQVLDPRLRQAGKPRGVKEGRIWSYLRDPRPWGGSDPPAVAYWFSPDRKGINPQTHLAQFRGI
LQADAYAGFRDLYKPDATGTVHVREAACWAHLRRAFHDVWKGSDSTIAREALEQIGELYDIERQITGHPAPYRLAVRQEQ
SRPRVTAFHAWCETQLARIPGKGELAKAIRYALNRWKAFTLFLEDGRVAIDNNPAERAIRPVCVGRKNYLFAGSDTGGDN
IADAMTLIESAKLSRLNPHDYLADVLARINEHKINRLHELLPWNWKPVNTLHRQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 4e-91 45
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-94 45
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 8e-94 45
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-91 44
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-94 44
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-93 44
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-94 44
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 3e-94 44
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 3e-94 44
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-94 44
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 2e-94 44
tnp AEA34686.1 transposase Not tested Not named Protein 1e-94 44
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-93 44
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 9e-98 43
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 2e-92 43
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 2e-92 43
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-86 42
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 4e-82 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GLX_16750 YP_004868457.1 transposase VFG0793 Protein 1e-94 44
GLX_16750 YP_004868457.1 transposase VFG1736 Protein 3e-79 44