Gene Information

Name : GLX_12800 (GLX_12800)
Accession : YP_004868062.1
Strain : Gluconacetobacter xylinus NBRC 3288
Genome accession: NC_016027
Putative virulence/resistance : Virulence
Product : two component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1471371 - 1472051 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
GTGCATATTCTTGTTGTTGAAGATGACCCCACCGTACGCAATTTCGTGGCCAAGGGCCTGAAGGAAGCCGGGCACCTGGT
TGAACTGACCGATAACGGCAAGGACGGCCTGTTCATGGCCGTAAGCGAGAAGTTCGACCTGATCATACTCGACCGCATGC
TGCCCGGCGGCATTGACGGCGTGCGCCTGCTTGAGACCATCCGCGCGCAGAACAACGCAACCCCCGTGCTGCTGCTCTCG
GCACTGGCGGATGTGGATGACCGCGTGCAGGGCCTCAAGGCAGGGGGCGATGACTACGTGACCAAGCCGTTTGCCTTCAG
CGAACTGCTGGCGCGCGTGGAAGCCCTCGGCCGCCGTGGCCGCACCGAGGTAGCACCCCAGACCAAGCTGGAACTGGCGG
ACCTGGAGATCGACCTGCTTTCGCGCACCGTGCGGCGCGCGGGGCAGAAGATCGACCTGCAGCCGCGTGAGTTCCGCTTA
CTGGAATACCTGACCCGCCACGCAGGCCAGGTCGTGACCCGCACCATGCTGCTCGAAGGTGTATGGGACTACCACTTCGA
CCCGCAGACCAACGTGATCGACGTGCATGTCTCGCGCCTGCGCCAGAAGGTGGATAAGCCCTTCGGCACGCCGCTCATCC
ATACCATCCGCAATGCGGGCTACATGCTGCGTGCGGAATAA

Protein sequence : 
MHILVVEDDPTVRNFVAKGLKEAGHLVELTDNGKDGLFMAVSEKFDLIILDRMLPGGIDGVRLLETIRAQNNATPVLLLS
ALADVDDRVQGLKAGGDDYVTKPFAFSELLARVEALGRRGRTEVAPQTKLELADLEIDLLSRTVRRAGQKIDLQPREFRL
LEYLTRHAGQVVTRTMLLEGVWDYHFDPQTNVIDVHVSRLRQKVDKPFGTPLIHTIRNAGYMLRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-40 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-39 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GLX_12800 YP_004868062.1 two component response regulator BAC0638 Protein 6e-40 53
GLX_12800 YP_004868062.1 two component response regulator BAC0125 Protein 9e-43 49
GLX_12800 YP_004868062.1 two component response regulator BAC0347 Protein 3e-43 48
GLX_12800 YP_004868062.1 two component response regulator BAC0111 Protein 3e-47 48
GLX_12800 YP_004868062.1 two component response regulator BAC0083 Protein 8e-43 47
GLX_12800 YP_004868062.1 two component response regulator BAC0197 Protein 3e-39 47
GLX_12800 YP_004868062.1 two component response regulator BAC0308 Protein 1e-40 46
GLX_12800 YP_004868062.1 two component response regulator AE000516.2.gene3505. Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GLX_12800 YP_004868062.1 two component response regulator VFG0596 Protein 2e-40 46
GLX_12800 YP_004868062.1 two component response regulator VFG1389 Protein 7e-33 42
GLX_12800 YP_004868062.1 two component response regulator VFG1390 Protein 1e-34 41