Gene Information

Name : GLX_12290 (GLX_12290)
Accession : YP_004868011.1
Strain : Gluconacetobacter xylinus NBRC 3288
Genome accession: NC_016027
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 1407493 - 1408758 bp
Length : 1266 bp
Strand : -
Note : -

DNA sequence :
TTGTGCGGTGCGGTGATAATCTGCTCGAAGAGGAGCCCCCGCATGAGCATTGATAAAGATCTTCTGGACCGTCTGATGGA
AGGTCGTTCACCGGGCGACCTGTTTGGCAAAAGCGGCATACTCTCGGAATTGACGAAGGCTCTGGCGGAGCGGGCGCTCA
ACACGGAGATGACACTTCATCTTGATGAGGAGCGCGCCGATGGCGCCTCTGCTGAGGATAATCAGCCGCCCAACCGCAGA
AACGGCAATAGCCAGAAGACCGTGACGACACAGAGCGGCAAGGTTGTTCTGGATATTCCCCGGGATCGGAACGGTACGTT
TGATCCGATGTTGATTGCAAAGTATCAGCGTCGCTTTCCCGAGTTCGACCGCAAGATCATCAGCATGTATGCCCGAGGTC
TGACAACCCGCGAAATCCAGGGGCATATTGAAGAAATCTATGGCGTTGAGGCCTCCCCGAGCCTCATTTCCGCGATTACC
GACGCCGTGATGGAGGAGGTCGCCGCCTGGCAGAACCGTCCGCTGGAACCCTGCTACCCGATCGTCTTCATGGACGCGAT
CCGGGTCAATATCCGCAGTGATGGGACTGTCTCGAACAAGGCTGTCTTCGTGGCGCTCGCGATCCTGCCTGACGGCACAC
GGGACGTTCTGGGGCTGTGGTTCCAGGCGAATGAAGGGGCCAAATTCTGGGCCAAGGTCCTCAGCGACCTGCGCAATCGG
GGTGTGCAGGACATCCTGATCGCCGTAGTCGACGGGCTGAAGGGCTTTCCGCAGGCCATTGAGGCGGTCTTCCCCAGAAC
CCGCATTCAGACGTGTATCGTTCATCTGCTGCGTCATTCCATGAGCTTTGCCAGCTACAAGGACCGCAAGGCCATCGCCA
CAGCTCTCAAGGCAATCTATACAGCAGTGGACGCCACAGAGGCCGAGGCAGCCCTCGGCGGGTTCGAAGAAAGCGATCTG
GGCAGACAATACCCGGCCATCGCGCCCAGTTGGCGCAGGGCATGGAATGAGGTCATTCCGTTCCTCGATTATCCTCCAGA
AGTGCGCAGGTTGATTTACACAACAAATGCCATTGAGGCCCTGAACTCAAAGATCCGTCGTGCCGTGCGCACCCGCGGCC
ATTTCCCCAGTGAAGAGGCCGCAGCAAAATTGATTTACCTGGCGCTCAATGCTACCTCAGCACAGTGGAAGCGCTCAGTG
CGCGAATGGTACGCTGTCAGATGCCAGCTCGCTATCATGTTCGATGATCGTTTCCCAATGGCCTGA

Protein sequence :
MCGAVIICSKRSPRMSIDKDLLDRLMEGRSPGDLFGKSGILSELTKALAERALNTEMTLHLDEERADGASAEDNQPPNRR
NGNSQKTVTTQSGKVVLDIPRDRNGTFDPMLIAKYQRRFPEFDRKIISMYARGLTTREIQGHIEEIYGVEASPSLISAIT
DAVMEEVAAWQNRPLEPCYPIVFMDAIRVNIRSDGTVSNKAVFVALAILPDGTRDVLGLWFQANEGAKFWAKVLSDLRNR
GVQDILIAVVDGLKGFPQAIEAVFPRTRIQTCIVHLLRHSMSFASYKDRKAIATALKAIYTAVDATEAEAALGGFEESDL
GRQYPAIAPSWRRAWNEVIPFLDYPPEVRRLIYTTNAIEALNSKIRRAVRTRGHFPSEEAAAKLIYLALNATSAQWKRSV
REWYAVRCQLAIMFDDRFPMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 9e-91 48
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 1e-82 44
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 1e-82 44
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 1e-83 43
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 1e-77 41