Gene Information

Name : fliI (MICA_751)
Accession : YP_004865087.1
Strain : Micavibrio aeruginosavorus ARL-13
Genome accession: NC_016026
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 741157 - 742509 bp
Length : 1353 bp
Strand : +
Note : -

DNA sequence :
ATGGACCGTCTCGCCGAACAAGCCGAAGCTTCAATCTCAATCCTGCCCGACTATCAAGTCTGTGGGCGGGTGACGAAGAT
TCTTGGGCTTTTGGTGGAAATTGCCGGATTTGGGTCCGATCTGACCATCGGGTCGCGGGTCCGCCTGCACCCGGCGCACG
CGCCATCCGTGCCGTGCGAGGTCGTGGGGTTCAAGGATGGCCGGGCGTTGCTGATGCCGTTTGGCAATCTGGACGGGATC
GGCCTGGGCAATCCGGCGGAGATTGAGGGGCGCAAGCCCGTCATCTGCCCGGATGATCGGTGGCTGGGCCGCGTGATCAA
TGGCATGGCACAACCAATCGATGGCAAGGGGCATTTGCCGATGGGGGGGCACCCGGTGCCGTTGCGGAATACACCGCCAC
CGCCGCACAGCCGCCAGCGTATGGGCGAAAAACTGGATCTGGGCGTCCGTGCCGTCAATACATTCACCCCCGTCTGCCGT
GGGCAGCGTATGGGGATCTTCGCGGGCTCTGGCGTTGGTAAATCGGTCCTGCTGTCGATGATGGCGCGGTATACCGAGGC
CGATATTTCCGTGATCGGTCTGATCGGGGAACGGGGACGCGAGGTTCAGGAATTTTTGGAAGACGATCTGGGCCCCGATG
GTCTGGCGCGATCGGTTGTGATTGTCGCCACCGGGGATGAACCCGCTTTGATGCGGCGGCAGGCGGCGTACACGACGCTG
GCCGTGGCCGAATATTTCCGCAGACAGGGGAAGCAGGTTTTGTGCCTGATGGACTCCGTCACGCGTTTCGCCATGGCCCA
ACGTGAAATCGGGTTGAGCGCGGGTGAGCCGCCAACGTCCAAGGGCTATCCGCCAACCACGTTCGGCGAATTGGCCCGAT
TGCTGGAACGCGCAGGTCCGGGTGGCCCGGGTGAGGGATCGATTACCGGGTTGTTCTCGGTTCTGGTCGAAGGGGATGAC
ACCAACGAACCAATCGCCGATGCCGTGCGTGGTATTATCGACGGCCACATCGTGATGGAGCGCGCCATTGCCGATCGCGG
GCGGTATCCGGCCATTAACGTGTTGCGGTCCGTATCACGGGCCTTGCCACGGGCGCTGAACGATGAACAGAACGCCATTT
TGAAACGCGCGAAGCAGGTGATTACCAGTTACGAGGATATGGCCGAGTTGATCCGCCTGGGTGCATACCGCAAGGGTACG
GACCCGAAGGTGGACGAGGCGATTGATCTGTACCCGAAAATGGAAGAGTTTCTGGCGCAGAACAAAGACGATAACACCAC
CATCGTCGAAGGATTTGCGCGGATGCAAGAGATGTTAAATTCCGTCGCCACACCGCGCGGCCGTCGTTTTTAG

Protein sequence :
MDRLAEQAEASISILPDYQVCGRVTKILGLLVEIAGFGSDLTIGSRVRLHPAHAPSVPCEVVGFKDGRALLMPFGNLDGI
GLGNPAEIEGRKPVICPDDRWLGRVINGMAQPIDGKGHLPMGGHPVPLRNTPPPPHSRQRMGEKLDLGVRAVNTFTPVCR
GQRMGIFAGSGVGKSVLLSMMARYTEADISVIGLIGERGREVQEFLEDDLGPDGLARSVVIVATGDEPALMRRQAAYTTL
AVAEYFRRQGKQVLCLMDSVTRFAMAQREIGLSAGEPPTSKGYPPTTFGELARLLERAGPGGPGEGSITGLFSVLVEGDD
TNEPIADAVRGIIDGHIVMERAIADRGRYPAINVLRSVSRALPRALNDEQNAILKRAKQVITSYEDMAELIRLGAYRKGT
DPKVDEAIDLYPKMEEFLAQNKDDNTTIVEGFARMQEMLNSVATPRGRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 7e-75 44
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-65 44
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-73 43
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-73 43
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 2e-72 42
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 2e-72 42
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-72 42
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-72 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-72 42
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-72 42
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-72 42
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-63 42
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-64 42
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-64 42
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-64 42
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-63 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_004865087.1 flagellar protein export ATPase FliI VFG2499 Protein 1e-81 47
fliI YP_004865087.1 flagellar protein export ATPase FliI VFG1254 Protein 2e-81 46
fliI YP_004865087.1 flagellar protein export ATPase FliI VFG2331 Protein 1e-79 44
fliI YP_004865087.1 flagellar protein export ATPase FliI VFG2144 Protein 8e-78 43
fliI YP_004865087.1 flagellar protein export ATPase FliI VFG0390 Protein 5e-76 42
fliI YP_004865087.1 flagellar protein export ATPase FliI VFG0192 Protein 2e-74 42
fliI YP_004865087.1 flagellar protein export ATPase FliI VFG0515 Protein 1e-64 42