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Name : lysS (MICA_687) Accession : YP_004865023.1 Strain : Micavibrio aeruginosavorus ARL-13 Genome accession: NC_016026 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 679193 - 680845 bp Length : 1653 bp Strand : + Note : - DNA sequence : TTGGGGTGTAACAGGGGTTTTGGGGGTCAAAAAGGGCATCATTTAAGGGGGTATCCGGGTGTTGAAAAGGGCGATAGGGC TTGCATTTTCGTATCGCATAAGCGACAAAATCAGGACCTGAAACAATTGTACCACGGTGATTTGAAAATGGGACAAAATC CAGCACAGAATTCTGAAACGACCGTAACCACAGCCGGGAACCCCCGTCTGGCGAAGCAGGTGAAGCTGGATGCCCTGAAG GCCGCCGGGATCGACCCGTACCCGCACGTTTTCCCGCGCACCCATCAAAACGGCACGCTGCAGGACATGTATAAAGACCT GCCGAATGGCACGGAAACCGATGATCACGTGGCCGTTGCCGGCCGGATCATGGCGATCCGGAACAATGGCATGTTCCTGG ACCTGATGGACCCGAGCGGGAAAATGCAGGTCTTCTGTCACAAGGATTCGATGTCGGAAGAGGCGTTGTCGATCCTCGAT TATTTCGATATTGGCGACATTATCGGGGCCGAAGGCACGGTGCGCCGCACCCCGCGTGGGGAACTGTCCGTCCGCGCGAA AAAGGTCACCATGCTGACCAAATCGCTGATGCCGCTGCCGGAGAAATATCACGGTCTGACCGATGTTGAGCAGCGTTACC GCCAGCGTTATCTGGACCTGATTATGAATGATGAAAGCCGTCAGAAATTGCTGATGCGCTCGAAAATCATCTCCACCATC CGGAAATTCATGGAAGAACATGGTGCGATTGAGGTTGAGACCCCGATGATGCACCCGATCCTGGGCGGTGCCTCGGCGAA ACCGTTCGTGACGCACCATAACGCGCTGGATGCCGATTTCTTCCTGCGTATCGCACCGGAACTGTATCTGAAACGTCTGA TCGTCGGTGGTCTGGCCGATGCGGTGTTTGAGATCAACCGCAATTTCCGGAATGAGGGGATTTCCTATAAACATAATCCT GAATTCACGATGATTGAATCTTACCACGCGTATAAAGACTATTACGATGTGATGGATCTGATCGAGAAACTGGTGCAGGC CGTGGCCATGGCCGTACACGGTACTCTGGAAATCAATTTCCAGGGCAATGTCATCAATCTGGGCAGCCCATGGGCGCGCA AAGGCATGGTTGAGCTGGTGCAGGAAGAAACCGGCGTTGACTTCATGTCGATGGATGCGGCCCAAGCCCACGCAGAAGCC AAAAAACTGGGCGTGCATGTCGATCCGAAGGCCAACTGGGGCCAGGTTGTCGAAACCATCTTTGGTGAGAAGGTGGAGCA TAAACTGATCCAGCCGATCCATGTGATTGACCACCCGCTGGATATTTCCCCGTTGTCCAAGGTTCACCGCAACAACCCGC GTCTGGTGGAACGGTTTGAGAGCTATATCAACGGCTGGGAAATGGCCAACGCCTTTACCGAGCTGAACGACCCGAAAATC CAGCATGACCGCTTTATGGATCAGGTGGCCCAGCGCGAAGGCGGAAACGAAGAAGCCATGATGGTGGACCATGATTTCGT CACGGCGCTGGAATATGGCCTGCCGCCGACGGGTGGTTGGGGGATGGGCATCGACCGTCTGACCATGATTATGACGGATT CGCATAACATCCGCGAAGTGATCGCCTTCCCGACGCTGAAGCCGGAGAAATAA Protein sequence : MGCNRGFGGQKGHHLRGYPGVEKGDRACIFVSHKRQNQDLKQLYHGDLKMGQNPAQNSETTVTTAGNPRLAKQVKLDALK AAGIDPYPHVFPRTHQNGTLQDMYKDLPNGTETDDHVAVAGRIMAIRNNGMFLDLMDPSGKMQVFCHKDSMSEEALSILD YFDIGDIIGAEGTVRRTPRGELSVRAKKVTMLTKSLMPLPEKYHGLTDVEQRYRQRYLDLIMNDESRQKLLMRSKIISTI RKFMEEHGAIEVETPMMHPILGGASAKPFVTHHNALDADFFLRIAPELYLKRLIVGGLADAVFEINRNFRNEGISYKHNP EFTMIESYHAYKDYYDVMDLIEKLVQAVAMAVHGTLEINFQGNVINLGSPWARKGMVELVQEETGVDFMSMDAAQAHAEA KKLGVHVDPKANWGQVVETIFGEKVEHKLIQPIHVIDHPLDISPLSKVHRNNPRLVERFESYINGWEMANAFTELNDPKI QHDRFMDQVAQREGGNEEAMMVDHDFVTALEYGLPPTGGWGMGIDRLTMIMTDSHNIREVIAFPTLKPEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-107 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004865023.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-108 | 46 |
