Gene Information

Name : MICA_2451 (MICA_2451)
Accession : YP_004866754.1
Strain : Micavibrio aeruginosavorus ARL-13
Genome accession: NC_016026
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2451698 - 2452936 bp
Length : 1239 bp
Strand : +
Note : -

DNA sequence :
ATGACGCTGACAAATACCACCTGCAAGAACGCCAAACCGAAGGAAAAGCCATACAAGCTGGCTGACGGTGGTGGATTGTA
TCTGCTGGTCAATCCCAATGGTGCAAAGCACTGGCGCCTCAAATACCGGTTTTTAGGCAAAGAAAAGCTGCTGGCCATCG
GGCCATATCCCCTCACATCCTTGGCAGACGCCAGACAAGCCCGGGACGACGCAAAGAAGCTCATACAGTCCGGCGCCGAC
CCGGTAAGCCATAAACGCGAAGGAAAGCGCAATGCCCTACGCAACGCGCAAAATACATTCGAGGCCGTCGCTCTGGAGTG
GGTTGAGAACCAGAAAGAACGATGGAGCCCCAAATACGCCGAGAAAGTCTTACGCGGCCTGACCGTGAACATCTTCCCGG
AAATAGGACAGCGGCCCATTGCGCAAATTACGCCACCGGAACTTCTGGATGCTCTTCGCAAAATTGAGAAACGAGGTGCA
CTGGATATTGCCGGCCGCACCAAGCAGATTTGCGGCCAGGTCTTCCGTTACGGTATCCAGACAGGCAAATGCACGCGGGA
CGCCTCAGCAGACCTCCGTGGCGCGCTAAAAGGCAGGAAAGCTGAACACTTCGCCTCCATCGACCCGAAAGAACTCCCCG
CATTCCTAAAAGCGCTGGGGCAAAACGATGCCCGTCTTTATGCCCGGACGCGCCGAGCCATCCATTTATCCATGCTGTGC
TTCACCCGGCCGGGCGAGATACGGCAAGCCCAATGGTCAGAAATGGACTTTGAAGCTCGCCAGTGGGTCATCCCAGCAGA
GCGCATGAAAATGCGCCGGGATCACATTGTTCCCCTTTCCATGCAGGCCATAGCCATTCTGGAAGCCCAGCGCGAAGAAA
CCGGAAAGCTCAATACGCCCTACGTCTTTCCCTCCCAGATCCAGCCCAGAAAGCCCATGAGCGATGGAACCGTCAATCAG
GCCGTTAAGCGCCTTGGCTATACGGACCGCATGACCGCCCACGGATTCCGCGCACTGGCCCGCACTGCCATTCGCGAAGC
GCTGGGATACGACAGTGAGATTATCGAGAAACAGCTCGCCCACCGCACATCCAACCCACTGGGTGAGGCTTACGACCGGA
CACAGTTTCTATCCCAGCGCAAAAAGATGATGCAGGATTGGGCAGACCACCTTGATTCCATTGCTCATACACATTTTCAA
ACAACCGCTTTAAAAATAGGCAACGGTCATGGTCGATAG

Protein sequence :
MTLTNTTCKNAKPKEKPYKLADGGGLYLLVNPNGAKHWRLKYRFLGKEKLLAIGPYPLTSLADARQARDDAKKLIQSGAD
PVSHKREGKRNALRNAQNTFEAVALEWVENQKERWSPKYAEKVLRGLTVNIFPEIGQRPIAQITPPELLDALRKIEKRGA
LDIAGRTKQICGQVFRYGIQTGKCTRDASADLRGALKGRKAEHFASIDPKELPAFLKALGQNDARLYARTRRAIHLSMLC
FTRPGEIRQAQWSEMDFEARQWVIPAERMKMRRDHIVPLSMQAIAILEAQREETGKLNTPYVFPSQIQPRKPMSDGTVNQ
AVKRLGYTDRMTAHGFRALARTAIREALGYDSEIIEKQLAHRTSNPLGEAYDRTQFLSQRKKMMQDWADHLDSIAHTHFQ
TTALKIGNGHGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAC31482.1 CP4-like integrase Not tested LEE Protein 8e-86 48
int ACU09430.1 integrase Not tested LEE Protein 8e-86 48
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 1e-85 48
ECs4534 NP_312561.1 integrase Not tested LEE Protein 1e-85 48
int AAD44730.1 Int Not tested SHI-2 Protein 1e-85 48
int CAC39282.1 integrase Not tested LPA Protein 6e-86 48
aec33 AAW51716.1 Int Not tested AGI-3 Protein 2e-86 48
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 8e-80 47
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 2e-83 47
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 3e-83 47
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 3e-83 47
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 6e-80 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MICA_2451 YP_004866754.1 phage integrase family protein VFG0783 Protein 5e-86 48
MICA_2451 YP_004866754.1 phage integrase family protein VFG0598 Protein 1e-83 47