Gene Information

Name : MICA_2209 (MICA_2209)
Accession : YP_004866516.1
Strain : Micavibrio aeruginosavorus ARL-13
Genome accession: NC_016026
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2218742 - 2219422 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCATTTTAATTATAGAAGACGAGCCAGAAGTTCTGTCCTACCTTGCCAAAGGGATGAGGGAGGCGGGCCATACGGC
CGATACGACCGCGAGTGGCAAGGAGGGATTGTTCCTGGCCACCACGGAAAATTATGACGTCCTGATCGTTGACCGCATGT
TGCCTGAACTGGATGGCTTGACCGTGATCAAAACCATACGAGGGGCCGGAAACACGACACCCGCCTTGATCCTCAGTGCG
CTGGGGGAGGTGGATGACCGGGTGAAGGGTTTGCGCTCGGGCGGGGACGATTATCTGGTCAAACCTTTTGCCTTTGCCGA
ACTTCTGGCCCGGGTTGAAATTCTGGCGCGACGAACCGGGAATGGCGCGCAGACGGCGGAGACAATTCTGGCCGCGGGTG
ACTTGACGCTAAACCTGTTGTCCCGAAAAATTACCCGCGGATCGCGTGACATTGATCTTCAGGCCCGTGAATTCAAACTT
TTGGAGTATTTGTTGCGCCACAAGGGGCAGGTGGTAACACGCACCATGCTTCTGGAGCATGTGTGGGATTATCATTTTGA
CCCACAAACCAATGTGATTGACGTTCATATTTCCCGGCTGCGCCGCAAGATCGACGAAAACGCAAAAAATCCGTTGATCC
ATACTGTGCGCGGTGCGGGGTATATGATCCGGGATGAATAG

Protein sequence : 
MRILIIEDEPEVLSYLAKGMREAGHTADTTASGKEGLFLATTENYDVLIVDRMLPELDGLTVIKTIRGAGNTTPALILSA
LGEVDDRVKGLRSGGDDYLVKPFAFAELLARVEILARRTGNGAQTAETILAAGDLTLNLLSRKITRGSRDIDLQAREFKL
LEYLLRHKGQVVTRTMLLEHVWDYHFDPQTNVIDVHISRLRRKIDENAKNPLIHTVRGAGYMIRDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-40 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MICA_2209 YP_004866516.1 response regulator BAC0083 Protein 2e-51 50
MICA_2209 YP_004866516.1 response regulator BAC0111 Protein 4e-53 49
MICA_2209 YP_004866516.1 response regulator BAC0197 Protein 2e-44 49
MICA_2209 YP_004866516.1 response regulator BAC0125 Protein 1e-50 48
MICA_2209 YP_004866516.1 response regulator BAC0347 Protein 7e-49 48
MICA_2209 YP_004866516.1 response regulator BAC0638 Protein 3e-44 48
MICA_2209 YP_004866516.1 response regulator BAC0308 Protein 9e-47 47
MICA_2209 YP_004866516.1 response regulator HE999704.1.gene1528. Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MICA_2209 YP_004866516.1 response regulator VFG1389 Protein 1e-40 44
MICA_2209 YP_004866516.1 response regulator VFG0596 Protein 2e-40 42
MICA_2209 YP_004866516.1 response regulator VFG1390 Protein 6e-43 41