Gene Information

Name : MICA_2176 (MICA_2176)
Accession : YP_004866484.1
Strain : Micavibrio aeruginosavorus ARL-13
Genome accession: NC_016026
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2185427 - 2186416 bp
Length : 990 bp
Strand : -
Note : -

DNA sequence :
ATGGCCCAGAAGCAGGCTGCGCAGCGCACGGCAGTCCGCAACGCCCAGAATACCTTTAAGGCCGTTGCGCTCGAATGGCA
TGAGAGGCAGCTCGACCGTTGGAGCGAAAACCACGCCCTCAACGTCATGCGACGTTTCGATATTGATATTTTTCCCTATA
TCGGTTCCCGCCCGATTGCTGACATTGATGCGCCTGAGTTGCTGGAAGTGCTGCGGAGGATCGAAAAGCGCGGCTCACTG
GACGTGGCGGCGCGGGTAAAGCAGATTTGCGGACAGGTTTTCAGGTACGGCATTGCAACAGGGCGTTGCAAGCGTGACCA
CGCCGCCGATCTTAGGGGAGCCTTGAAAACAGCCAAGACCCAGCACTATCCAGCGCTGGACATCAAGGAAATGCCGGAAT
TTCTGAAAGCGCTGGAGCGTAATGAACCAAGGCTTTTCAGCCGCACGCGCAAGGGAATCCGGCTACTGATGCTGACCTTT
GTTCGCACCAGTGAATTGATTAAGGCGACATGGGATGAGTTCGATTTGGAAGAGGGCCGGTGGGTGATCCCCGCAGAGCG
TATGAAGGTCGGAGGTGCGCATACCGTACCGTTGTCCAGACAGGCCATAAAAATCCTGAAAGAACTGAAGGAAGAAACCG
AGCATCTCAACGTCAAATGGGTATTTCCAAGTCAGGTGCGTCCAAAGGAGCATATGAGCAACAACACGCTTCTCTTTGCT
ATCGGTAGGCTGGGGTATAAAGGGCGCATGACGGGTCATGGTTTCCGTGCGCTGGCCATGTCCACGATCAAGGAAAATCT
GGGGTATCGCCATGAGATTGTTGATCGTCAGTTGGCACATGCCCACAAAAGTAAAATTGACCGCGCTTACGACCGCTCCA
AGTTTCTTCCTGATCGCATTGTGATGATGCAGGAATGGGCCGACTATCTGGATTCAGTGGAATCTGGAGGCAAGATTGTT
TTTGCGGATTTTAGAAAGAAGAGAGCATAG

Protein sequence :
MAQKQAAQRTAVRNAQNTFKAVALEWHERQLDRWSENHALNVMRRFDIDIFPYIGSRPIADIDAPELLEVLRRIEKRGSL
DVAARVKQICGQVFRYGIATGRCKRDHAADLRGALKTAKTQHYPALDIKEMPEFLKALERNEPRLFSRTRKGIRLLMLTF
VRTSELIKATWDEFDLEEGRWVIPAERMKVGGAHTVPLSRQAIKILKELKEETEHLNVKWVFPSQVRPKEHMSNNTLLFA
IGRLGYKGRMTGHGFRALAMSTIKENLGYRHEIVDRQLAHAHKSKIDRAYDRSKFLPDRIVMMQEWADYLDSVESGGKIV
FADFRKKRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 7e-53 45
ECs4534 NP_312561.1 integrase Not tested LEE Protein 7e-53 45
int AAC31482.1 CP4-like integrase Not tested LEE Protein 5e-53 45
int ACU09430.1 integrase Not tested LEE Protein 5e-53 45
int AAD44730.1 Int Not tested SHI-2 Protein 4e-53 45
int CAC39282.1 integrase Not tested LPA Protein 1e-53 45
aec33 AAW51716.1 Int Not tested AGI-3 Protein 5e-54 45
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 1e-52 45
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 1e-52 45
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 1e-52 45
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 4e-51 44
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 2e-53 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MICA_2176 YP_004866484.1 phage integrase family protein VFG0783 Protein 3e-53 45
MICA_2176 YP_004866484.1 phage integrase family protein VFG0598 Protein 6e-53 45