Gene Information

Name : MICA_2045 (MICA_2045)
Accession : YP_004866355.1
Strain : Micavibrio aeruginosavorus ARL-13
Genome accession: NC_016026
Putative virulence/resistance : Virulence
Product : fecCD transport family protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2057013 - 2057870 bp
Length : 858 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGACCTGCTGCTCGAACCCTTTACCTATATGTATATGGTGAAAGCCATCGGCGTCAGCGCCCTGGTTGGATGCGT
TTGCGCGTTCTTGTCATCGTACCTGATGCTCAAGGGCTGGTCCCTGATGGGGGATGCGCTGGCGCATTCCATCGTGCCCG
GTGTGGCGCTGGCCTATCTTCTGGCTTTGCCTTACGCTGTCGGCGCGTTTTTTGCGGGGCTTCTGGCCGCGGGCAGCATG
GCGCTGGTGCGGCAGAAAACAAAATTGCGCGAAGACACGATTATCGGGCTGATCTTCACCACATTTTTTGCCGTTGGCCT
GTTGCTGGTGTCCATTAACCCGATGGCGGTGAATATTCAATCCATCGTTTTGGGCAATATTCTGGCCATTTCCGATTCCG
ACGTGATGCAAGTGGTGATTATTTCCGTGATCTGCCTGATTGCGCTGACCTTAAAATGGCGGGATTTGATGGCGGTGTTT
TTTGATGAAAAGCACGCCCAATCCATCGGCCTGCATGTCATGCCGTTGAAAATCCTGTTCTTCACCTTGCTCAGCGCCGC
GACCGTGGCTGCGTTGCAAACCGTGGGCGCATGCCTGGTCATCGCCATGGTGGTTACGCCGGGGGCAACGGCGTATCTGT
TGACCGACCGTTTTGGCCGCTTGATTGCCATTGCCATGGTCATTGGCACGCTGACCAGCGCCATGGGGGCCTATGCCAGC
TATTACCTGAACGCCAATCCGGGCGGGTTAATTGTGTGTTTGCAAACCATCCTGTTTTTCGGCGCATTCCTGTTTTCGCC
GAAATACGGGCTGGTGCCACGCAAACGCGCGATGCGTAACACCGCAATGGGGGTATAG

Protein sequence : 
MIDLLLEPFTYMYMVKAIGVSALVGCVCAFLSSYLMLKGWSLMGDALAHSIVPGVALAYLLALPYAVGAFFAGLLAAGSM
ALVRQKTKLREDTIIGLIFTTFFAVGLLLVSINPMAVNIQSIVLGNILAISDSDVMQVVIISVICLIALTLKWRDLMAVF
FDEKHAQSIGLHVMPLKILFFTLLSAATVAALQTVGACLVIAMVVTPGATAYLLTDRFGRLIAIAMVIGTLTSAMGAYAS
YYLNANPGGLIVCLQTILFFGAFLFSPKYGLVPRKRAMRNTAMGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 7e-70 63
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 5e-70 63
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-70 63
sitC NP_461784.1 permease Virulence SPI-1 Protein 7e-70 63
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 7e-70 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MICA_2045 YP_004866355.1 fecCD transport family protein BAC0441 Protein 5e-72 69
MICA_2045 YP_004866355.1 fecCD transport family protein BAC0351 Protein 3e-70 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MICA_2045 YP_004866355.1 fecCD transport family protein VFG0527 Protein 3e-70 63