Gene Information

Name : MICA_2044 (MICA_2044)
Accession : YP_004866354.1
Strain : Micavibrio aeruginosavorus ARL-13
Genome accession: NC_016026
Putative virulence/resistance : Virulence
Product : ABC transporter family protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2056147 - 2057016 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGACGCCACCATTCACCTGCACAATGTCGGCGTGACATACCCGAACGGGCACAGCGCCCTGCATGACGTCAATGT
CACGCTGCATTCCGGGGTGATTTGCGGCCTGGTCGGGGTGAATGGGGCGGGGAAATCGACGCTGTTCAAAACCATGATGG
GGTTTATCACCCCCACCACGGGCACGGTGACCATTGCCGGGCAAAGCGTGAAGCAGGCCTTGCGCCGAAATATGGTCGCC
TATGTCCCGCAGACGGAGGAAGTGGACTGGAACTTCCCCGTGCTGGTCGAAGATGTGGTGATGATGGGGCGGTACGGCCA
TATGGGTTTCCTGCGCACCCCGAAACAACCCGACCGTGACGCGGTGGACAGCGCTCTGAAACGCGTCGGTATGTTTGATT
ACAAAAAACGCCAGATTGGTGAGCTGAGCGGTGGCCAGAAAAAACGTATTTTCGTCGCCCGTGCGCTGGCCCAGGGTGGG
TCGATCATCCTGCTGGATGAACCCTTCACCGGCGTTGATATTAAAACCGAAGCCTCCCTGATCGAATTATTCCGGTCACT
GGCCGCCGAAGGGCGGATGATTCTGGTCTCTACCCACAATCTGGGCAGTGTGCCGAGTTTTTGTGACGAGGTCATTTTGA
TCAATCGCACGGTCGTCGCCTATGGCCCGGTGGAAACCACCTTTACCGAAGCCAATTTGACCAAAGTCTTTGGCGGTATG
TTGCGCCACCTGCAACTGGCGGGTCGCGATCTGCATGATGACGAAGATTCACGGTGTGTCACGGTGTTGACCGATGATGA
ACGCCCGCTGGTTCTGTACGGAGAACAAGGCGGTGAGCGGATCGTGAAAACAGGACGCGATAAGCCATGA

Protein sequence : 
MNDATIHLHNVGVTYPNGHSALHDVNVTLHSGVICGLVGVNGAGKSTLFKTMMGFITPTTGTVTIAGQSVKQALRRNMVA
YVPQTEEVDWNFPVLVEDVVMMGRYGHMGFLRTPKQPDRDAVDSALKRVGMFDYKKRQIGELSGGQKKRIFVARALAQGG
SIILLDEPFTGVDIKTEASLIELFRSLAAEGRMILVSTHNLGSVPSFCDEVILINRTVVAYGPVETTFTEANLTKVFGGM
LRHLQLAGRDLHDDEDSRCVTVLTDDERPLVLYGEQGGERIVKTGRDKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-79 61
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-79 61
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-79 60
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-79 60
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-79 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MICA_2044 YP_004866354.1 ABC transporter family protein BAC0440 Protein 5e-89 63
MICA_2044 YP_004866354.1 ABC transporter family protein BAC0350 Protein 1e-79 60
MICA_2044 YP_004866354.1 ABC transporter family protein BAC0400 Protein 7e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MICA_2044 YP_004866354.1 ABC transporter family protein VFG0526 Protein 1e-79 60