Gene Information

Name : MICA_2018 (MICA_2018)
Accession : YP_004866328.1
Strain : Micavibrio aeruginosavorus ARL-13
Genome accession: NC_016026
Putative virulence/resistance : Resistance
Product : transporter, solute:sodium symporter family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 2014677 - 2016239 bp
Length : 1563 bp
Strand : +
Note : -

DNA sequence :
TTGAATGTAACCGCCGTTATTGTTTTCTTCCTGTTCGTGACGCTCAGTTTGGGCATCACCTACTGGGCGGCCAAGCGCAC
AAAAACGCGATCTGATTTCTATGCGGCGGGCGGGCGCATCACCGGGTGGCAGAATGGCCTGGCAATCTCCGGCGATTATA
TGTCGGCGGCGTCCTTCCTTGGGATTTCCGGGCTCGTCTTTGCCTCTGGCTTTGACGGGCTTCTTTATTCAATCGGCTTC
CTTGTGGGCTGGCCTATCATCCTGCTGCTGATCGCCGAACCTTTGCGGAATTTAGGGAAATACAATTTTTCCGATGCGGC
GTCATTGCGTTTCAAACAAACCCCCATCCGCATCATGGCCGCATTCGGATCGCTGGCCACAGTGTGCCTTTATCTGATTG
CCCAGATGGTGGGCGCAGGAAAACTGATCGAAGTTCTGTTCCACCTGCCCTACGAATCCGCCGTTGTGATTGTCGGCGTT
TTGATGGTGTCCTATGTCACATTCGGCGGCATGCTGGCCACCACATGGGTGCAGCTGATCAAGGCTGTCTTATTGCTGGG
CGGCGCGACCATTGTCGCGGTTCTGGTTCTGGCGCATTTCCATTTCAACCTGCCTGCCTTGTTCGCGGCCGCCGTTGAAA
AACACACCAGCGGCGCGGCCATTATGGCCCCGGGCACGTTGGTGAAGGACCCCATATCCGCCATCTCGCTGGGGATGGCG
CTCATGTTCGGCACCGCCGGCCTCCCCCATATTTTAATGCGCTTTTTCACTGTGAAGGATGCCAAGGCCGCCAACAAATC
CGTGGTCGTGGCCACGGGCTTTATCGGCTATTTTTACATCCTGACTTTTATCATCGGGTTTGGCGCGATTGTATTTTTGA
CCGGGCAACCATCCTACGTCGATGGTAATGGCGCGCTGGTCGGTGGCAATAACATGGCCGCCGTGCAATTGGCCCATGCC
GTGGGCGGCGACATTCTGCTCGGCTTTATCTCTGCCGTGGCCTTTGCCACCATTCTGGCGGTGGTCGCCGGGTTGACACT
GGCCGGGGCCTCGGCCATTTCACACGATTTATATGCCCGCGTTTTCAAGGGCGGCAATGTCACGGAGAAACAGGAAGTGC
GTGTATCCAAAATGGCGACCATTGGGTTGGGCGTCGTTGCGATCTTCCTGGGGATTGCGTTTGAACAACAAAACGTTGCC
TTTATGGTCGGTTTGGCTTTTGCCATCGCGGCCAGCGCGAACTTCCCCATCATCCTTCTGTCCATGTACTGGCCAGGCAT
GACGACGCGCGGCGCCGTTGTGGGTGGATCGATGGGCTTGGGCGTCGCTGTTGTTCTGATGATCCTCAGCAAAACCGTAT
GGGTCAGTGTTCTGGGCTATGACGAACCGATTTTCCCGTATGAATACCCGGCTCTGTTTTCGATGACGGCGGCCTTTGTC
GGGATTTGGCTGTTTTCGGTCACCGATCGGTCAGATCGCGGCCAAACCGACCGCGCCGTGTTCCACGCCCTGCACCTGCG
GGCGCAGACAGGCATCGGTGTGGACGATGCTGTTGAGCATTAA

Protein sequence :
MNVTAVIVFFLFVTLSLGITYWAAKRTKTRSDFYAAGGRITGWQNGLAISGDYMSAASFLGISGLVFASGFDGLLYSIGF
LVGWPIILLLIAEPLRNLGKYNFSDAASLRFKQTPIRIMAAFGSLATVCLYLIAQMVGAGKLIEVLFHLPYESAVVIVGV
LMVSYVTFGGMLATTWVQLIKAVLLLGGATIVAVLVLAHFHFNLPALFAAAVEKHTSGAAIMAPGTLVKDPISAISLGMA
LMFGTAGLPHILMRFFTVKDAKAANKSVVVATGFIGYFYILTFIIGFGAIVFLTGQPSYVDGNGALVGGNNMAAVQLAHA
VGGDILLGFISAVAFATILAVVAGLTLAGASAISHDLYARVFKGGNVTEKQEVRVSKMATIGLGVVAIFLGIAFEQQNVA
FMVGLAFAIAASANFPIILLSMYWPGMTTRGAVVGGSMGLGVAVVLMILSKTVWVSVLGYDEPIFPYEYPALFSMTAAFV
GIWLFSVTDRSDRGQTDRAVFHALHLRAQTGIGVDDAVEH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 3e-132 57
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 6e-78 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MICA_2018 YP_004866328.1 transporter, solute:sodium symporter family protein BAC0564 Protein 1e-162 69
MICA_2018 YP_004866328.1 transporter, solute:sodium symporter family protein BAC0570 Protein 4e-139 61