Gene Information

Name : fliP (MICA_1706)
Accession : YP_004866021.1
Strain : Micavibrio aeruginosavorus ARL-13
Genome accession: NC_016026
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1704235 - 1705113 bp
Length : 879 bp
Strand : +
Note : -

DNA sequence :
ATGACACAGCCAAAAACGGATAATGCCCCCCGCCGCATTGTGAAGAACAAAGTCGCCCTGTGGGGATTGGCGTTGTCCGC
CATATCCATGGTCATCCTGATGATCCTGATCAACACGCCCGCCTTTGCACAAAGCGTGACACTGGACATGGGTGCCGGCG
CACAGGACGGCACGGTCAGTGGCCGCGTTGTTCAGTTGGTTGCGTTACTGACCATTCTGTCGCTGGCGCCATCTATCCTG
ATCATGATGACGTCGTTCACGCGGATTATTGTGGTGCTGTCCTTCCTGCGGACCGCCATCGGGATTCAGCAGACGCCGCC
AAACACGGTGATGATTTCACTGGCCATCTTCCTGACCTTCTTCATCATGGCTCCGACGTTCCAGACCGCGTATCAGGCGG
GCGTCGTCCCGTTGATCGAAGAACAGATTGACGAAGTCGAAGCCTTCAAACGCACCGTTGAACCGTTCCGCGAATTCATG
GTCAAGCATGTGCGGGAAACCGACCTGGCCCTGTTCGCGCAAATGAACCAGTCCGAACCCTTCCCCAGCCCGGAAGCCGT
ACCGCTGCAGGTATTGATTCCGGCCTTTATGATTTCGGAATTGCGCCGGGCTTTTGAAATCGGGTTTATGCTGTTCCTGC
CCTTCGTGATTATCGACATGGTCACGGCGTCCATCCTGATGTCCATGGGTATGATGATGCTGCCGCCTGTGATGATCTCA
CTGCCGTTCAAAATCGTATTCTTTGTTCTGGTGGATGGCTGGCACCTGCTGGCCGGAACATTGGTGCAAAGTTTCGATGT
CGGCGCCGTTCCGATCAATATGCCCGCCCCGGCGTTGATCCCTGATGTTCCGGCAGAAGCGATCGGAACCGTACCTTAA

Protein sequence :
MTQPKTDNAPRRIVKNKVALWGLALSAISMVILMILINTPAFAQSVTLDMGAGAQDGTVSGRVVQLVALLTILSLAPSIL
IMMTSFTRIIVVLSFLRTAIGIQQTPPNTVMISLAIFLTFFIMAPTFQTAYQAGVVPLIEEQIDEVEAFKRTVEPFREFM
VKHVRETDLALFAQMNQSEPFPSPEAVPLQVLIPAFMISELRRAFEIGFMLFLPFVIIDMVTASILMSMGMMMLPPVMIS
LPFKIVFFVLVDGWHLLAGTLVQSFDVGAVPINMPAPALIPDVPAEAIGTVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 7e-27 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 4e-27 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 4e-27 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 3e-27 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 6e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_004866021.1 flagellar biosynthetic protein FliP VFG2338 Protein 2e-48 53
fliP YP_004866021.1 flagellar biosynthetic protein FliP VFG2494 Protein 5e-51 53
fliP YP_004866021.1 flagellar biosynthetic protein FliP VFG1259 Protein 4e-44 51
fliP YP_004866021.1 flagellar biosynthetic protein FliP VFG2016 Protein 1e-43 47