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Name : hsdR (MICA_1248) Accession : YP_004865573.1 Strain : Micavibrio aeruginosavorus ARL-13 Genome accession: NC_016026 Putative virulence/resistance : Unknown Product : putative type I restriction enzyme R protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1236374 - 1239205 bp Length : 2832 bp Strand : + Note : - DNA sequence : ATGAGCACACAAACCGAACAACAATTAGAAAATGCGCTTGTTGCCCAGCTTGAAACACTGGGTTGGGAAAAGGTTGCGAT TGCCAATGAAGAAGAGCTTCTGGTCAATCTCAAGCGGCAACTGGAAAAACATAATAAGGTTTTGTTTTCTGATTACGAGT TCAAACAAATTTTGAACAAGATGGCGCGTGGCAATATTTTTGAAAAAGCCAAAATCCTGCGCGATAAGGTCGATTATACC AAAGATGATGGAACAACGGGTTATATCGAGCTGATTAATCAAGTTCAATGGTGCAAGAACGAGTATCAGGTTACGCACCA AATCACGATGGTAGGGAAATACACCAATCGTTATGACGTGACGTTACTGGTCAATGGCTTGCCGCTTTGCCAGATCGAGC TGAAACGGCGCGGTCTTGAAATGAAAGAGGCATTTAATCAGACAAACCGTTATCACAAGCACAGTTTTGCTGCCGGATAT GGGTTGTTTGGTTATATCCAGCTTTTTGTTATTAGTAATGGCGTAAATACCAAATATTATGCGAATAATCCCGTCAATAA ACGGGATTTCAAACAAACCTATTTTTGGGCTGATAAGGCGAACAACAGGATAACGCAACTTAGTGAGTTTGCGGCGATAT TTCTTGAGAAATGCCAGCTTTCAAAGCTAATTGCCAAATACGTTGTGCTGAATGAAAGTCGTCAAATGTTGATGGCTTTG CGTCCGTATCAATATTATGCGGTGGAGGCCATTGTAGCACAGGTTCTAACCACTAATAAAAATGGTTATATCTGGCATAC AACAGGATCAGGTAAGACCTTAACCTCGTTTAAAGCGGCACAAATACTAACCCAGAATCCAAAAGTACATAAAGTTGTCT TTGTCGTTGACCGTAAAGACCTCGATTATCAGACGATTGCAGAGTTCAATAGTTTTCAGGAAGGCAGTGTGGATGCAACG AACAACACGGGAAGGCTGGTTGAGCAATTCGGAGATAGTACGCCTCTCATTGTTACTACTCTGCAAAAGCTAAATACAGC GATTAGCAAAGAGCGCCATCTAAAAACGATGGAAAGCCTTAAAGATAAGAAGATGGTTTTTATCTTTGACGAGTGTCACC GCAGCCAGTTCGGTGATACGCATAAGCGCATTACTGAGTACTTTGATAATGTGCAGATGTTCGGCTTCACAGGAACACCT ATCTTTGCTGATAACGCGGCCAAGAATGCGCTTGGTAAGCGCACGACTAAAGACCTATTTGGGCAGCAACTTCATAGCTA TGTAATTACCGATGCTATTCGGGACGAGAATGTTCTGAAATTTTGTGTTGAATATATCCGTACCTTTAAGCGCAAGGACG ATATTGTCGATATTGAAGTTGAAGCGATTGATACCGCAGAGGTGATGGAAGCGCCTGAGCGGCTGGAAAAAATTACTGAT TATATTATTGCCAATCACGATCGGAAAACACATAGCCAAGAATTCACGGCGATGTTCTGCGTTTCTAACGTAAAGAGCCT TGTTGCTTATTACGAACTGTTCCGCGCCAAGAAAGAAGCAGGTGAACATAATCTTAAAGTGGCCACGATCTTTTCTTATC AGGCAAACGAAGAAGATGCTGACGCGGATGGCATGGGAACGGGAGATGATATGCCTGACGAGGGCGCTCCTGAAAATAAG CATAGCCGTGAAAAACTTGATGAGTATATTGCTGATTATAATAAAATGTTCAGCACGAATTACTCCACAAAAGACAGCAA GCTTTTTTATGCCTACTACAAGGATATTGGTAAGCGGGTAAAGAACAAGGAAGTGGATGTTCTGCTTGTCGTGAATATGT TCCTGACAGGTTTTGACAGCCCGCCATTAAACACTATTTACGTTGATAAAAATTTGAAATATCACGGTCTTCTGCAAGCC TATTCGCGCACAAACAGAACGATGGGGCAAAAGAAATCTCAAGGTAATATTGTCTGCTTCCGCAACTTAAAATCTGCCAC AGATAAGACTATCGAACTCTTCGCAAACAAGGAGGCACAGGAAGATATTATTCTTGCACCGTATGAGGACTATGTGAAGA AGTTTGAGCAGGCTGTAGCAAACCTTCTAGCGATCACGCCTGATGTTGCAAGTGTTGATAATCTTCTGACTGAAGAGGAT GAGGCCAAGTTTATTCAAGCCTTCCGTGAAGTAATCCGGATTAAAAACGTCCTTGATTGCTTCACGCAATTCACTTTTGA TGATTTGCCTATGGACGAGCAACTCTTTGCTGATTTCCGAAGCAAATATCTTGATCTGTATGACAAGGTGAGAAGTGAAA AGGAAAAAGAAAGAATATCGATTCTTGATGATATCGATTTTGAGATTGAGCTGATTAGCCGCGACAAAATCAATGTGAGT TATATTATTAGTCTTCTTCGTAACATGAAGGGTAAAAAGCCGGAAGAGCAGGCAAGAGCACGAAAAAGTATTATGGACAT CCTCGATACAGAGGCGCAGCTCAGAAGCAAAAAAGAACTTATTGAAAGGTTTATATCGCAACATTTTGCTGATATGCCAG CAACCGCAGATGTTGGCGATGAATTCGAATCTTATTGGGATCAGGAAAAGCAGAAAGCGCTCGTAGTCCTCAGTGATGAG GAGGGGCTAGACCCTGAAGGTCTTGAGAAAGTTCTCGGTAATTATCTATTCACTGAGAAGCCGCCCATGCGGGATGAGGT TATCGAGATAATGAATTCTCGACCATCACTAAGGGAGCGCGCCACTGTTGCTGAGCGCGTGATCGGGAAGATACGCGATT TTGTCGAAACATTTATTGATGGCGTAGATTGA Protein sequence : MSTQTEQQLENALVAQLETLGWEKVAIANEEELLVNLKRQLEKHNKVLFSDYEFKQILNKMARGNIFEKAKILRDKVDYT KDDGTTGYIELINQVQWCKNEYQVTHQITMVGKYTNRYDVTLLVNGLPLCQIELKRRGLEMKEAFNQTNRYHKHSFAAGY GLFGYIQLFVISNGVNTKYYANNPVNKRDFKQTYFWADKANNRITQLSEFAAIFLEKCQLSKLIAKYVVLNESRQMLMAL RPYQYYAVEAIVAQVLTTNKNGYIWHTTGSGKTLTSFKAAQILTQNPKVHKVVFVVDRKDLDYQTIAEFNSFQEGSVDAT NNTGRLVEQFGDSTPLIVTTLQKLNTAISKERHLKTMESLKDKKMVFIFDECHRSQFGDTHKRITEYFDNVQMFGFTGTP IFADNAAKNALGKRTTKDLFGQQLHSYVITDAIRDENVLKFCVEYIRTFKRKDDIVDIEVEAIDTAEVMEAPERLEKITD YIIANHDRKTHSQEFTAMFCVSNVKSLVAYYELFRAKKEAGEHNLKVATIFSYQANEEDADADGMGTGDDMPDEGAPENK HSREKLDEYIADYNKMFSTNYSTKDSKLFYAYYKDIGKRVKNKEVDVLLVVNMFLTGFDSPPLNTIYVDKNLKYHGLLQA YSRTNRTMGQKKSQGNIVCFRNLKSATDKTIELFANKEAQEDIILAPYEDYVKKFEQAVANLLAITPDVASVDNLLTEED EAKFIQAFREVIRIKNVLDCFTQFTFDDLPMDEQLFADFRSKYLDLYDKVRSEKEKERISILDDIDFEIELISRDKINVS YIISLLRNMKGKKPEEQARARKSIMDILDTEAQLRSKKELIERFISQHFADMPATADVGDEFESYWDQEKQKALVVLSDE EGLDPEGLEKVLGNYLFTEKPPMRDEVIEIMNSRPSLRERATVAERVIGKIRDFVETFIDGVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0054 | YP_300144.1 | type I site-specific restriction-modification system restriction subunit | Not tested | SCC15305cap | Protein | 6e-179 | 43 |
