Gene Information

Name : Cabther_B0487 (Cabther_B0487)
Accession : YP_004864002.1
Strain :
Genome accession: NC_016025
Putative virulence/resistance : Unknown
Product : type I restriction system adenine methylase (hsdM)
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : 2.1.1.72
Position : 590645 - 592252 bp
Length : 1608 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGAGCACGACCAGATCCGCCTGGGCAAGACGCTCTGGGCCATCGCCGACCAGCTGCGCGGCGCGATGAACGCCGA
CGACTTCCGCGACTACATGCTGGCCTTCCTCTTTTTGCGCTACCTCTCGGACAACTACGAGGAAGCCGCCAAACGGGAAC
TGGGAAGGGACTGGCCCGAGCCTGCCCCAGGCGAGCGGCGTTCGCTGCTGGCGGTGTGGTACGAAAAGAACCCGGACGAC
ATCCCGACCTTCGAGGAGGTGATGCGCCGCAAGGTGCACTACGTCATCAAACCCGAATACCTCTGGAGCAGCATCGCCGA
GCTGGCCCGCACCCAGGACGCCGAGCTGCTGCACACGCTGCAAAAAGGCTTCAAGTTCATCGAGAACGAGTCCTTTGGCC
GCAGTTTCCAGGGGCTGTTCTCGGAGATCAACCTCGACTCGGACAAGCTCGGCAGAACCTACGCCCAGCGCAACGAACGC
CTTTGCGCCATCATTCAGCGGATCGCCGAAGGCCTGGCGGAGTTTCCCCAGGAGCGCGACCTCTTGGGCGATGCCTACGA
GTACCTGATCGGGCAGTTCGCCGCCGGGAGCGGCAAAAAGGCCGGCGAGTTCTACACCCCGCAGCAGATCTCGAGCATCC
TCTCGGGCATCGTCGTTCTGGACGCCCAGGACCCCGCCAGCGGTCGGCGTGCGAAGCTGGGCAGGGTGCTGGATTTCGCC
TGCGGCTCCGGCTCGCTGCTCCTCAACGTGCGCCGGCGGATGGGACGGGACGGCGTGGGCAAGCTCTACGGCCAGGAGAA
GAACATCACCACCTACAACCTGGCCCGCATGAACATGCTGCTGCACGGGCTGCGCGATACCGAGTTCGAGATCTTCCACG
GCGATACACTCACCAACGAATGGCCGCTCCTGCGCGAAGAGAATCCGGCCAAGAAGATCGAATTTGACGCGGTGGTGGCC
AATCCTCCCTTTAGCTACCGCTGGGAGCCCAGCGAAGCCCTGGCGGAGGATTTCCGCTTCAAGGGGTACGGGCTGGCCCC
CAAATCGGCGGCGGATTTTGCGTTCCTCCTGCACGGCTTCCACTTCCTGCACCGTGAGGGGACCATGGCCATCATCATGC
CCCACGGTGTGCTCTTCCGCGGCAACAGCGAAGCCAAGATCCGAAAGAAACTGCTGGAGGACAACCACATCGACGCCGTC
ATCGGCCTGCCGGCGAACCTGTTCTACTCCACCGGCATCCCGGTCTGCATCCTGGTGCTCAAAAAGTGCAAGAAGTTCGA
CGACGTGCTGTTTATCAACGCGGCGGAACACTACCAGAAGGGCAAACGGCAGAACCTGCTGCTGCCCGAACACGTGGACA
GGATCGTGGAGACATACCAGTACCGCAGGGAGGAGCCGCACTACTCCCGGCGGGTGAGCCTGGAGGAGATCAGGCAGAAC
GAGTTCAACCTCAACATCACCCGGTATGTCAGCACGGCTAAAGCAGAGCCGGAAATAGATTTACAGCAAGTTCATCAAGA
GCTTGCTGAGTTGACCCGTAAGATGGAAGAGGCTCGCGCTCGGCATAATGCGTTTCTAAAAGAGCTCGGACTTCCGGAAC
TACGTTAG

Protein sequence :
MSEHDQIRLGKTLWAIADQLRGAMNADDFRDYMLAFLFLRYLSDNYEEAAKRELGRDWPEPAPGERRSLLAVWYEKNPDD
IPTFEEVMRRKVHYVIKPEYLWSSIAELARTQDAELLHTLQKGFKFIENESFGRSFQGLFSEINLDSDKLGRTYAQRNER
LCAIIQRIAEGLAEFPQERDLLGDAYEYLIGQFAAGSGKKAGEFYTPQQISSILSGIVVLDAQDPASGRRAKLGRVLDFA
CGSGSLLLNVRRRMGRDGVGKLYGQEKNITTYNLARMNMLLHGLRDTEFEIFHGDTLTNEWPLLREENPAKKIEFDAVVA
NPPFSYRWEPSEALAEDFRFKGYGLAPKSAADFAFLLHGFHFLHREGTMAIIMPHGVLFRGNSEAKIRKKLLEDNHIDAV
IGLPANLFYSTGIPVCILVLKKCKKFDDVLFINAAEHYQKGKRQNLLLPEHVDRIVETYQYRREEPHYSRRVSLEEIRQN
EFNLNITRYVSTAKAEPEIDLQQVHQELAELTRKMEEARARHNAFLKELGLPELR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 1e-91 45
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 9e-92 45
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 9e-92 45
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 9e-92 45
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 1e-91 45
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 1e-91 45
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 1e-91 45
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-91 44
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 9e-92 44
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-91 44
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 6e-91 44
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 2e-91 44
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 9e-92 44
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 2e-91 44
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 9e-92 44
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 2e-91 44
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 2e-91 44
ORF6 BAC22943.1 - Not tested etd PI Protein 3e-91 44
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 3e-90 44
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 1e-91 44
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 1e-91 44
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-91 44