Gene Information

Name : Cabther_B0254 (Cabther_B0254)
Accession : YP_004863773.1
Strain :
Genome accession: NC_016025
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 310430 - 311881 bp
Length : 1452 bp
Strand : +
Note : -

DNA sequence :
ATGCTCATTGACGGACAGCTCGTTGGGGCTGAAAACGGGCGTGTTTTTCACACGGTTTCGCCGGCCGATGGGATGCCGCT
GGCGGCGGTTCCCCATGCTTCAGTCGCCGACGCCGAGCGGGCGGTACAGGCGGCGCGTGCAGCCTTTGAACTGGGCACCT
GGCGCAATGCCGACGGCTCGATGCGGGCGAAGATTCTGAACCGGCTGGCTGACCTCATCGAAGCCAATCTCGATGTTCTG
GCGCAGCTTGAAGCTATGGATCAGGGCAAGCCGGTTGGCTATGCCCGCGCCTTTGAAATCCCGGTGGTGGTGGACACGTT
CCGGCACTTTGCCGGCTGGGCTGACAAAATCTACGGCGAAACCATCCCGGTGCCGGCATCGGGATTGGATTTTACGTTGC
GGGAGCCGGTGGGCGTGTGTGTAGGGTTTGCGCCCAACAACTATCCGCTGGTGTTGGCGGCGTTCAAAATCGCTCCGGCA
CTGGCGGCTGGCAACAGTGTGGTGCTTAAGCCATCGCCGGCAACGCCGCTCACGGCGCTGAAACTGGGCGAGTTGTGTGT
GTCCGCCGGACTGCCCGATGGGGTGCTCAATATCGTCACCGAACCGGGGCATGAAGTGGCGGCTTACCTGCTTGAACATC
CTGAAGTGGATTTGGTGTCGCTGACCGGTGGGACGGAAACCGGCAAGCTGGTGAGCCGGGCCGCGGCCGGGACGCTCAAA
CGGGTGCTGCTCGAACTTGGCGGCAAGTCGCCGTTCATCATCTGTGCCGACGCCGACATGGAGCTGGCCGTGACGGGCGC
GCTGATGGGGACGTTTTACAACTCCGGCCAGACCTGTACGGCGAGCACGCGGATTTTCGTCCACCGCGCTGTGTACGAGG
AATTCCTGGAGCGCTTTGCTGCGGAAGCTGACCGGCTCGTAGTGGGTCCACCGCTCGATGAGGCGACCAACAACGGCCCA
CTCGTGACCCGCAGCCAATACGAGAAGGTGCTGGGTTACATCGAATTGGGGCAGGCAGAAGGCGCACGGCTCATCACGGG
CGGCACGCATCCGGCCGGGCTGCCGGAAGCCGGCAACTATCTGCGCCCCACCATCTTTGCCGACGCGCACAATCGCATGC
GCATTGCGCAGGAGGAAATCTTTGGGCCTGTGGCGTCGGTCATTCCTTTCGAGGATGAAGACGAGGTGATTGCCCAGGCC
AACGATTCGGTTTATGGGCTGGCGGCTTCCGTCTGGACGCGCGACATCAAGCGCGGTCTCAGCATGATGAAAGCCCTGCG
TGCCGGGCAGGTATGGATCAACAACCACAACATCTTTTTCCCGCACGCGCCCTTTGGGGGCTACAAGCAAAGCGGCAATG
CCCGTGAGGGAGGCGCGGAGGCGCTGCGCCACTACACGCAGGTCAAAAATGTCTATGTCGAACTGGGGGATATGTTGCTG
ACCCCGTTCTAG

Protein sequence :
MLIDGQLVGAENGRVFHTVSPADGMPLAAVPHASVADAERAVQAARAAFELGTWRNADGSMRAKILNRLADLIEANLDVL
AQLEAMDQGKPVGYARAFEIPVVVDTFRHFAGWADKIYGETIPVPASGLDFTLREPVGVCVGFAPNNYPLVLAAFKIAPA
LAAGNSVVLKPSPATPLTALKLGELCVSAGLPDGVLNIVTEPGHEVAAYLLEHPEVDLVSLTGGTETGKLVSRAAAGTLK
RVLLELGGKSPFIICADADMELAVTGALMGTFYNSGQTCTASTRIFVHRAVYEEFLERFAAEADRLVVGPPLDEATNNGP
LVTRSQYEKVLGYIELGQAEGARLITGGTHPAGLPEAGNYLRPTIFADAHNRMRIAQEEIFGPVASVIPFEDEDEVIAQA
NDSVYGLAASVWTRDIKRGLSMMKALRAGQVWINNHNIFFPHAPFGGYKQSGNAREGGAEALRHYTQVKNVYVELGDMLL
TPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 4e-77 44
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-69 44
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 4e-62 42
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 6e-61 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-71 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-71 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-71 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-70 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cabther_B0254 YP_004863773.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 1e-70 41