Gene Information

Name : Cabther_A0954 (Cabther_A0954)
Accession : YP_004862227.1
Strain :
Genome accession: NC_016024
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1133134 - 1133886 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAAAGCAACGGCGATCGCCGCCGCAGGTGAACAACCGACAACAATCATGGCCCCGGCCGTTTCCCTTCAGCATGT
GAACAAGAGCTTCGGGGTCGGCAACACGTACCTGCCGGTGCTCAAGGACATCAGCCTCGACATCCGACGTGGCGAACTGC
TGCTTCTGGTCGGACCGTCAGGTTGTGGCAAAACCACGCTTCTGTCGGTGATGGCCGGCATTCTGGATACCGATGACGGT
GTGGTGGATGTGTTCGGTACACGGGTGGATCGGCTGTCGCAGTCCCAGAAAACCCGTTTCCGGCAGCAGACCATCGGGTT
CATTTTCCAGCAGTTCAACCTCATTCCGACCTTGACCGCGACGGAAAATGTCGCCGTACCGCTCATCATCAACGGGCGTC
CCTACCGGGAGGCGCTGGAACGCGCCGAGCACTACCTGGACCTCGTGGGGTTGGGAAATCGTCTGGACCACTTCCCAACC
CAGCTTTCCGGCGGACAGCAGCAGCGGGTGGCCATTGCGCGGGCGCTCGTGGCCGAGCCACGGCTGGTTGTCTGCGATGA
GCCGACGGCGGCGCTCGACGGCGCAACGGGACAGATGGTGATGGAGATGTTCCGCAAGGTGGCCCTGAGCGCCGACCGGG
CCATTGTGGTCGTCACGCACGACAACCGCATTTTTCCCTACGGCGACCGCATTGCCGAAATGCTCGATGGGCGCATCGTG
GATGTGCATGACAACCCTGACCACATCAAGTGA

Protein sequence : 
MAKATAIAAAGEQPTTIMAPAVSLQHVNKSFGVGNTYLPVLKDISLDIRRGELLLLVGPSGCGKTTLLSVMAGILDTDDG
VVDVFGTRVDRLSQSQKTRFRQQTIGFIFQQFNLIPTLTATENVAVPLIINGRPYREALERAEHYLDLVGLGNRLDHFPT
QLSGGQQQRVAIARALVAEPRLVVCDEPTAALDGATGQMVMEMFRKVALSADRAIVVVTHDNRIFPYGDRIAEMLDGRIV
DVHDNPDHIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cabther_A0954 YP_004862227.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-35 42
Cabther_A0954 YP_004862227.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-27 42