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Name : Cabther_A0430 (Cabther_A0430) Accession : YP_004861707.1 Strain : Genome accession: NC_016024 Putative virulence/resistance : Virulence Product : type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 506406 - 508007 bp Length : 1602 bp Strand : + Note : - DNA sequence : ATGCTTCCCTCGGCGGAAGAAGCCGACCGTGAACTGGCGGCGGCGCGTGAACTGGCGCGGCGCTACCGGCTCGAATTCGT GGATTTGACTACGGCCGAACTGGATTACGACCTCATCCACAGCCATCCGGTGGAGTTGATGACCCGGTACAAGTTCGTCC CCCTGCGCCGGGAAAACGGACGGCTGCTGGCGGCCATGGCTGATCCGACCAACCTCGATGCCTTGGATGAGCTGTCGGCC CAGTTGAAGGTGCGTATCAAACCGGCCGTCGCCACCCGGTCGGCCATTGAAACCGCCCTGCGCCGTGGGGATTCCGCCCA GCGCGTCCTGCAGGACGCCACGGAGTCATTCCGCATCAAGCTGGTCAAGGAAACCGACCAGGGCGAGCAGGACCTCGATC TCGACCGCCTGGCGGATGAAACCGCCCCCGTCATCAAGCTCGTGGACACCATCGTGCTGACGGCACTCGAACGGCGGGTT TCCGACATCCACATCGAGGCCTACGAGTCAGAAGTGCACGTCAAGTACCGCATTGACGGGGCACTCTATCCGGCGATGAA TCCGATTGATGCGAGTTATCACCAGATGCTCATCTCACGCATCAAGGTCATGTCGGACCTTGACATTGCCGAGCGCCGGA CACCCCAGGACGGACGCTTCCGGGTGCGCGTCAAGGGGCGGACGATTGACTTTCGCGTCTCCATCATTCCGGCTGCCTTT GGTGAAAACTGCGTCATCCGTATTCTGGACAAACAGCAGATCAACGAAGCCTTCCGCGAACTGACACTCAACGTGGTGGG ATTTGACCCCCACGACCTGGCGCGCTTCCGGCGGTTCATCAAGGAACCCTACGGTATGGTGCTTGTCACCGGGCCGACGG GTTCCGGGAAAACGACGACGCTTTACGCCGCGCTCAACGAAATTGCCAATCCCGAAGACAAGATCATCACCATCGAGGAT CCGATTGAGTACCAACTGCGCGGCATCATGCAGATTCCGGTCAACGAGAAAAAGGGCCTCACCTTTGCCCGTGGTCTGCG CGCCATCCTGCGGCATGACCCGGACAAGGTCATGGTTGGCGAAATCCGTGACACCGAAACCGCCCAGATTGCCATCAACG CCGCGCTGACCGGCCACCTGGTTTTCACCACGGTTCACGCCAACAATGTCATTGACGTTATTGGCCGATTCGTCAACATG GGGGTCGAAGTCTATAACTTCGTCAGTTCCCTCAACTGCGTTCTGGCGCAGCGTCTGATCCGGCAGCTTTGCCCCTATTG CAAGCGGCAATACCAGCCGACGGACCAGGAACTCGAAGAAGCGGGCCTCAATCCAAGCAAGTTTCGGGATCAGGTTTTTT ACGAGGCCGTGGGCTGCTCGGAATGCAACGGAACCGGCTACCGGGGACGCACGGCCATTCACGAAATGCTGGACTTGACC GATCGCATCCGCGAACTCATCCTCGACCGGCGCCCCGGCTCGGAGATTCGCCGCGCCGCGCGGGAAGAAGGGCTGGGTTC GCTGCGTGAATCGGCACTGAAAAAGGTATTTGCCGGAATTTCGACGTTGCGCGAAATCAACCGCGTGACGTTCGTCGAAT AA Protein sequence : MLPSAEEADRELAAARELARRYRLEFVDLTTAELDYDLIHSHPVELMTRYKFVPLRRENGRLLAAMADPTNLDALDELSA QLKVRIKPAVATRSAIETALRRGDSAQRVLQDATESFRIKLVKETDQGEQDLDLDRLADETAPVIKLVDTIVLTALERRV SDIHIEAYESEVHVKYRIDGALYPAMNPIDASYHQMLISRIKVMSDLDIAERRTPQDGRFRVRVKGRTIDFRVSIIPAAF GENCVIRILDKQQINEAFRELTLNVVGFDPHDLARFRRFIKEPYGMVLVTGPTGSGKTTTLYAALNEIANPEDKIITIED PIEYQLRGIMQIPVNEKKGLTFARGLRAILRHDPDKVMVGEIRDTETAQIAINAALTGHLVFTTVHANNVIDVIGRFVNM GVEVYNFVSSLNCVLAQRLIRQLCPYCKRQYQPTDQELEEAGLNPSKFRDQVFYEAVGCSECNGTGYRGRTAIHEMLDLT DRIRELILDRRPGSEIRRAAREEGLGSLRESALKKVFAGISTLREINRVTFVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-86 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-86 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cabther_A0430 | YP_004861707.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG0182 | Protein | 8e-84 | 48 |
| Cabther_A0430 | YP_004861707.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG2048 | Protein | 5e-87 | 45 |
| Cabther_A0430 | YP_004861707.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG1876 | Protein | 2e-81 | 45 |
| Cabther_A0430 | YP_004861707.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG1880 | Protein | 4e-80 | 45 |
| Cabther_A0430 | YP_004861707.1 | type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | VFG2426 | Protein | 2e-75 | 44 |
