Gene Information

Name : Cabther_A2171 (Cabther_A2171)
Accession : YP_004863425.1
Strain :
Genome accession: NC_016024
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 2569658 - 2570341 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
GTGCTCACCGTCCACCAACTGACCTACCGCTATCCGCCAGCGTCGCCCGGACAGCCGCCGCTCGTGGTTTTTGAAAACCT
GTCGTGGGCGGTGGAAGGCAGAGCGGCGGCCGCCATTGTGGGCGCGTCGGGCGTGGGAAAGTCCACGCTGCTGCACGTTC
TGGGCGGCCTCGATGCGCCAGCGGCCGGTGAAGTACGCATTGGCAGCACGTCCCTGTGGGAACTGTCGCCAACGGAGCGC
GCGCGCTTTCGGAACCGGAGCATCGGCTTCGTCTTTCAGTTCCACCACCTGCTGCCGGAGTTCACGGCCCTGGAAAACGT
CGCCCTGCCGATGCGGATGGCCGGCGTCAGATGGGATGAAAGCTGCCGGCGGGCCCGGCGGCTGCTGGAGCGCGTCGGTC
TGGAGCAGCGCCAGCATCACCTGCCGGCAGAGCTTTCCGGCGGGGAAAGTCAGCGGGTGGCGCTGGCGCGGGCGCTGGCC
AATGCGCCGCCGCTGCTGCTGGCCGACGAGCCAACCGGCAACCTCGATGAGCGGACAGCGGCTGACGTTCTCGGTCTGCT
CCATGAACTTCAGCGCGACCAGGGTCTGACGCTGGTGCTTGTCACGCACGACAGCCGGCTGGCCGCCACCTGTCAGCAGG
TCTGGCGGTTGGAACGTGGTCAACTGACGCCGGTCGTGGCTTGA

Protein sequence : 
MLTVHQLTYRYPPASPGQPPLVVFENLSWAVEGRAAAAIVGASGVGKSTLLHVLGGLDAPAAGEVRIGSTSLWELSPTER
ARFRNRSIGFVFQFHHLLPEFTALENVALPMRMAGVRWDESCRRARRLLERVGLEQRQHHLPAELSGGESQRVALARALA
NAPPLLLADEPTGNLDERTAADVLGLLHELQRDQGLTLVLVTHDSRLAATCQQVWRLERGQLTPVVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-17 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-17 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-17 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cabther_A2171 YP_004863425.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 8e-20 47
Cabther_A2171 YP_004863425.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 1e-25 41