Gene Information

Name : Cabther_A1602 (Cabther_A1602)
Accession : YP_004862868.1
Strain :
Genome accession: NC_016024
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1930771 - 1931469 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence :
ATGATTGAACTGAAGCAGCTTTCCAAGCAAGCCCTCAGCGGCCAGAGCCGCCTGACGATTCTCCACCCGCTTGATCTCTT
CATTCCGGCCGGACAGTTTGCCGCCATTCTTGGCCCTTCCGGGAGCGGGAAATCCACGCTGCTCGGTCTGATGGCCGGGT
TGGATACGCCGACGACCGGCGAGGTCATCCTGGCCGGGACTTCCATCACGCGCCTGGGGGAAGACGCGCTGGCCGCATTT
CGGAGCCGCACCATCGGGTTTGTCTTTCAGGCGTTTCACCTCATCCCGACGGCAACCGCCCTCGAAAACATCCAGATTCC
CATGGAGATTGCCGGGCGACGGGACGCCAAAAAGCGCGCCAAAGCCTTGCTTGCGGCCGTAGGTCTCAGCGCCCGGGGGC
ATCACTACCCGGCGCAGCTTTCCGGCGGCGAGCAGCAACGGGTGGCCATTGCCCGCGCCTTTGCCAACGAGCCGCCCATT
CTGCTGGCCGATGAGCCGACCGGCAATCTGGACTACGCCAACGGCATGCGCATTTTCGAGCTGCTGCGTGAACTCAACCA
GTCCACCGGAACGACGCTCGTGCTGGTGACACACAACGAGGAGTTGGCGCGGGCGGCCGACCGCGCCATCACACTGCGCG
ACGGCCGCATTGTGCTCGACAACCCGAAGCTCTCCATCGAGCCGTTACCTTCCACTTAG

Protein sequence :
MIELKQLSKQALSGQSRLTILHPLDLFIPAGQFAAILGPSGSGKSTLLGLMAGLDTPTTGEVILAGTSITRLGEDALAAF
RSRTIGFVFQAFHLIPTATALENIQIPMEIAGRRDAKKRAKALLAAVGLSARGHHYPAQLSGGEQQRVAIARAFANEPPI
LLADEPTGNLDYANGMRIFELLRELNQSTGTTLVLVTHNEELARAADRAITLRDGRIVLDNPKLSIEPLPST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cabther_A1602 YP_004862868.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-28 48
Cabther_A1602 YP_004862868.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 5e-38 47
Cabther_A1602 YP_004862868.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 6e-37 45
Cabther_A1602 YP_004862868.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-34 42