Gene Information

Name : Bcoa_0910 (Bcoa_0910)
Accession : YP_004858908.1
Strain : Bacillus coagulans 36D1
Genome accession: NC_016023
Putative virulence/resistance : Unknown
Product : integrase catalytic protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 980354 - 981142 bp
Length : 789 bp
Strand : +
Note : PFAM: Integrase, catalytic core; KEGG: afl:Aflv_2449 transposase

DNA sequence :
TTGCGCAACCAGGGGCCATCAAAAAAAGAGGCTTATCTGAAAGAAATTCGACAGAAAATAAGCAAGTCTTTTCATGAGAG
CCAGGGGACGTATGGGAGTCCAAGAGTACACAATGACCTGGTTGAATGGGGCTATACCATTTCCCAAAAAACAGTAGCCC
GCTTGATGAAGGAAATGGGTTTGTCAGCCTCGTCTAAAGAAAAGTTCGTTGTTACAACAGATTCCAATCACGATATGAAG
ATTTATCCTAATCTTCTCAAACGCCAGTTTAAAACAGAAGGGCCGAATCAGGTTTGGGTGGTGGATATTACTTATATCTG
GACGCTTGAGGGCTGGGTATATTTATCATCCGTGATGGACTTGTTTTCGAGGAAAATAGTGGGATGGCGTATGGGCGGAC
GTATGAAAAAAGAGTTGCCAATCCAAGCATTGAATATGGCGATTACTTCAAGGCAACCTGGGGAAGGGCTGGTCCATCAT
TCAGACAGAGGATCCCAGTATTGTTCCAAAGAATATACAGATATTCTAAAAGCAAACGGAATACAAATCAGCATGAGCAG
AAAAGGAGATCCATACGACAATGCTTGTATCGAATCTTTTCACGCCACTATCAAGAAGGATTTAATACACAGGAGGCGCT
TTGAAACCAGGGCTGCGGCAATGAGAGCTATAAATTACTATATTAGCAGTTTTTACAATGAACGGCGAAAGCACTCCACC
TTAGGGTATGTCTCACCCAACCAATTTGAGAGGAAACACCAGCAAATAACAGAAGAAAATATCTCATAA

Protein sequence :
MRNQGPSKKEAYLKEIRQKISKSFHESQGTYGSPRVHNDLVEWGYTISQKTVARLMKEMGLSASSKEKFVVTTDSNHDMK
IYPNLLKRQFKTEGPNQVWVVDITYIWTLEGWVYLSSVMDLFSRKIVGWRMGGRMKKELPIQALNMAITSRQPGEGLVHH
SDRGSQYCSKEYTDILKANGIQISMSRKGDPYDNACIESFHATIKKDLIHRRRFETRAAAMRAINYYISSFYNERRKHST
LGYVSPNQFERKHQQITEENIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-51 48
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-51 48
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-51 48
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-49 47
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-49 47
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-49 47
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-49 47
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-49 47
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-49 47
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 9e-50 47
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-49 46
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-49 43
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 7e-44 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 4e-42 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 7e-42 41
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 9e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcoa_0910 YP_004858908.1 integrase catalytic protein VFG1706 Protein 8e-50 47
Bcoa_0910 YP_004858908.1 integrase catalytic protein VFG1631 Protein 4e-44 41