Gene Information

Name : Bcoa_0054 (Bcoa_0054)
Accession : YP_004858060.1
Strain : Bacillus coagulans 36D1
Genome accession: NC_016023
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 52968 - 54293 bp
Length : 1326 bp
Strand : -
Note : TIGRFAM: flagellar protein export ATPase FliI; ATPase, type III secretion system, FliI/YscN; Flagellar protein export ATPase, FliI; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit

DNA sequence :
ATGAAAGCAACCGATCTCTTAGACTATATACCCGAAATTGGGACGTTTAAACATTACGGAAAAGTAAAAAGAGTGATCGG
CTTAATGATCGAATCACTCGGGCCGGAAAGCTCCATCGGTGACGTCTGTTATATTCATGTGGATAACAAAAAAAATACGA
AAAAAATCATTGCCGAAGTTGTCGGGTTCCGTGACGGGAATGTTATTTTAATGCCTTATACGAACATCCAAGAAATTTCT
CCCGGCAGCCTTGTGGAAGCAACAGGGAAACCGATGCGGGTGAAAGCAGGCCCACGGCTGTTGGGGAAAGTCATTGATCC
TTTGGGCGTGCCGCTCGACCATTCCCCGCTTCCCGCCGGCCTAAAACCGATTCCGATCGACCGGACGCCCCCCAACCCGC
TCAAGCGCCCGCCGATCAGGGAACCGATTGAGCTTGGCGTCCGCGCGATCGACAGTCTGCTGACGGTTGGAAAAGGCCAG
CGGATCGGCATATTTGCTGGAAGCGGCGTCGGCAAAAGCACCCTGCTCGGCATGATTGCACGCAACACAAATGCCGATCT
GAATGTGATCGCCCTAATCGGGGAGCGGGGCAGGGAAGTAAGGGAATTTATTGAACAAGATCTCGGCCCTGAAGGTTTAA
AAAAGTCCATTGTTGTCGTGGCAACAAGCGACCAGCCGGCATTGATGCGGATTAAAGGCGCCTATACAGCAACAGCGATA
GCGGAATATTTCAGGGACCAGGGGCTAAATGTCATGTTTATGATGGACTCGGTTACCCGGGTCGCGATGGCCCAGCGTGA
AGTCGGACTGGCAACGGGGGAACCGCCGGCTACAAAAGGATATACCCCGTCCGTTTTCGCGATTTTGCCGAAACTTTTGG
AAAGGACCGGAACAAATGAGTCCGGCACGATTACCGGGATCTACACCGTGCTTGTCGACGGGGATGATTTGAATGAACCG
ATTGCCGATACGGTGCGCGGCATTTTAGACGGGCATTTTGTTCTGGACAGGGATTTGGCAAATAAAGGGCAATACCCGGC
TATCAATATTTTAAAAAGCGTTAGCCGACTGATGAGCCAACTTGCCAGTCCTGCACACAAAAAAGCCGCAGAAAAGATTC
GCGAACAGTTAAGCACTTATTTGAATTCAGAGGACCTGATCAATATCGGCGCTTATAAACCGGGCGCATCAAAAGAAATT
GATGAAGCGATCGAACGCTATCCGAAAATCGTTTCTTTTATCAAACAAAGCACCGACGAAACCTATAGTATGGAAAGCAG
TATCCGGGCTTTAATCGGACTTGCGGAAACGGGTGAGTGGGCATGA

Protein sequence :
MKATDLLDYIPEIGTFKHYGKVKRVIGLMIESLGPESSIGDVCYIHVDNKKNTKKIIAEVVGFRDGNVILMPYTNIQEIS
PGSLVEATGKPMRVKAGPRLLGKVIDPLGVPLDHSPLPAGLKPIPIDRTPPNPLKRPPIREPIELGVRAIDSLLTVGKGQ
RIGIFAGSGVGKSTLLGMIARNTNADLNVIALIGERGREVREFIEQDLGPEGLKKSIVVVATSDQPALMRIKGAYTATAI
AEYFRDQGLNVMFMMDSVTRVAMAQREVGLATGEPPATKGYTPSVFAILPKLLERTGTNESGTITGIYTVLVDGDDLNEP
IADTVRGILDGHFVLDRDLANKGQYPAINILKSVSRLMSQLASPAHKKAAEKIREQLSTYLNSEDLINIGAYKPGASKEI
DEAIERYPKIVSFIKQSTDETYSMESSIRALIGLAETGEWA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-97 50
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-91 50
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-99 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 7e-100 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-98 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-99 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-99 49
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-98 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-99 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-96 48
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-96 48
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-84 48
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-84 48
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-84 48
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-84 48
escN AAC38383.1 EscN Virulence LEE Protein 9e-85 48
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-82 48
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-85 48
escN AAK26715.1 EscN Virulence LEE Protein 7e-84 48
escN AAL57542.1 EscN Virulence LEE Protein 7e-84 48
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-84 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-84 48
escN AAC31513.1 L0034 Virulence LEE Protein 3e-84 48
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-84 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-84 47
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-84 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-87 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-88 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-87 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 4e-88 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-88 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 5e-78 43
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 5e-71 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 6e-80 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-74 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-74 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-104 52
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-100 51
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG0192 Protein 4e-99 50
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG0390 Protein 2e-98 49
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG1254 Protein 7e-97 49
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG2499 Protein 1e-91 49
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG0730 Protein 5e-85 48
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG0812 Protein 2e-84 48
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG2331 Protein 9e-88 46
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG0515 Protein 1e-87 46
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG1008 Protein 2e-71 42
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG2459 Protein 2e-74 41
Bcoa_0054 YP_004858060.1 flagellar protein export ATPase FliI VFG1778 Protein 3e-70 41