Gene Information

Name : Bcoa_1494 (Bcoa_1494)
Accession : YP_004859480.1
Strain : Bacillus coagulans 36D1
Genome accession: NC_016023
Putative virulence/resistance : Unknown
Product : alpha amylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 1619305 - 1620999 bp
Length : 1695 bp
Strand : -
Note : KEGG: crn:CAR_c13980 oligo-1,6-glucosidase; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region

DNA sequence :
TTGCAAGATGCGTGGTGGAAAGAAGCTGTCATCTATCAGGTATATCCGCGCAGTTTCAAAGATGCAAACGGGGACGGCGT
GGGCGATATCCCGGGCATCATTGAAAAGCTGGATTATATCCGTGATCTCGGGGCAACGGCCATCTGGCTCAATCCGATTT
TCGCATCGCCGCATGTGGACAATGGCTATGATGTCAGCAACTACGAAAAAATCGACCCGGTTTTCGGCACGATGGAAGAT
GTGGAACACCTGATCAAGGAAGCGAAAAAACGCGGGCTTAAAATCATTCTGGACCTTGTGCTGAACCATACGTCAGACCG
CCACCCGTGGTTCCAAGAAGCGCGGAAAAGCAAAGAAAATCCGTACAGGGATTACTACATTTGGCATGACCCTGTCAAAG
GGCGTGAACCGACGAACTGGGCGAGCTTTTTCGGCGGCAGCACATGGACATTGGATCAACAAACCGGGCAATATTATTTT
CATCTGTTCAGCGACAAAATGCCCGATCTGAACTGGGAGAACAAAAAAGTGCGCGAAGAAATGGCAAAAATCGCCCTATT
CTGGCTGGATAAAGGTGTGGACGGATTCCGGCTGGATGCGGTCATTCACCTGGCAAAGGACACCCGTTTTCTTCCCGTTA
AAACAAAATCGGAAGAAGCCTTTGTGCTTGCAGAACAGTATTATGCCAACCTGCCGCGTGTCCATGATTATATCCGTGAA
TTTAACCGTACGATTAAAGCGAAGCATCCAGAAGCTTTTTTAATCGGGGAAACAGCTTCCGCCGACACGAAGCTTGCCCG
GCTTTATTCAAGGCCGGACCGCGAAGAATGCGACTGCATCATTACCTTTAACTACTTAGGGTTTGACACAGAAGCAAAAA
AACCTGGCATTCCGCAAAACTGGCAACAGGGAAAATGGGACTTGCTTGCTTTTAAAAAAGCGATGTCCCAGTGGCAACAT
GACTTGTACGGGGAAGGCTTCAATTCGCTCTACTGGAATAATCATGATATGCCGCGGGCCTTGTCGCGTTTCGGGGACGA
AGGTAAATACCGGGAAAAAAGCGCAAAGATGCTTGCTACTTTGATGTATTTGCAATGGGGGCTGCCGATTTTGCTGCAGG
GCGAAGAAATCGGCATGGTGAACTTGAAGCTCCCGCGGCTCCAAGACTATGAGGACCCAAGTATCAAAGGGCTTGCCACA
ATTGCGAAAAAGAAAGGCTATGCGGAGGAAGAAATTTTAAAAATGGTGCAACAGCGCTCTAAAGATACGTCAAGAGGCGC
CATGCAGTGGAACAATGATCGATACGGCGGCTTTTCTACATATGCTCCGTGGCTCGGCATCAATGAAGATACGCGGACCG
TGAACGTAGCGGCGCAGGAAAAAGATCCCGGCTCCGTGCTGCATTATTACCGGAAGCTGATCGAACTGAAAAAATCAATG
CCTGTCTTTACGGCCGGCAGCTGGGAAATGCTGGCTGATGAGGACCCGGACATCTACGCGTATATACGGAAGCATGAAGG
CAGCTGTGCCATGATTGTCTGCAATACATCGAAAAAGCTGCAGACCTTTACCTGCCCGGAGCTTACCCGCCACAGATGGG
CATGCCTGCTCAATAACAACGGCTATCATAGCAAAGCGGTGCCAAGCAAACTGGTGCTATCGCCTTTTGAATGCTTTGTT
TTATTACAGGAGTAG

Protein sequence :
MQDAWWKEAVIYQVYPRSFKDANGDGVGDIPGIIEKLDYIRDLGATAIWLNPIFASPHVDNGYDVSNYEKIDPVFGTMED
VEHLIKEAKKRGLKIILDLVLNHTSDRHPWFQEARKSKENPYRDYYIWHDPVKGREPTNWASFFGGSTWTLDQQTGQYYF
HLFSDKMPDLNWENKKVREEMAKIALFWLDKGVDGFRLDAVIHLAKDTRFLPVKTKSEEAFVLAEQYYANLPRVHDYIRE
FNRTIKAKHPEAFLIGETASADTKLARLYSRPDREECDCIITFNYLGFDTEAKKPGIPQNWQQGKWDLLAFKKAMSQWQH
DLYGEGFNSLYWNNHDMPRALSRFGDEGKYREKSAKMLATLMYLQWGLPILLQGEEIGMVNLKLPRLQDYEDPSIKGLAT
IAKKKGYAEEEILKMVQQRSKDTSRGAMQWNNDRYGGFSTYAPWLGINEDTRTVNVAAQEKDPGSVLHYYRKLIELKKSM
PVFTAGSWEMLADEDPDIYAYIRKHEGSCAMIVCNTSKKLQTFTCPELTRHRWACLLNNNGYHSKAVPSKLVLSPFECFV
LLQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 1e-104 44