Gene Information

Name : pyk (RATSFB_0085)
Accession : YP_004856573.1
Strain : Candidatus Arthromitus sp. SFB-rat-Yit
Genome accession: NC_016012
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 111092 - 112513 bp
Length : 1422 bp
Strand : +
Note : -

DNA sequence :
GTGAGAAAGACAAAAATAGTGTGTACAATAGGTCCTGCTAGTGAAAAATACGAAATATTAAAAGAACTTATTGAAAAGGG
TATGAATGTTATGAGACTTAATTTTTCTCATGGCGATTTTGAGGAACATGGAAGCAGAATAAAATTAGTTAGAGAAATTA
GCGAAGAACTAAATAAAAATGTAGGAATAATGCTTGATACAAAAGGACCTGAAATTAGGACTAAGAAATTTGAAGGAAAG
GTTTTACTAAATCAAGGAGAGGAATTTATTATATATACAAAAGAAGATGTGGTTGGAGATTCAACTAGATGCTCTGTTAC
TTATGAAGATCTTTATAAAGATGTAGAAGTTGGAGGGAAAATACTTATAGATGATGGTTTGGTAGCCCTTGAAATCAAAA
ACATAGAGGAAGGTAAGATAACTTGTGTTGTTTTAAATTCTGGAGAGGTTTCAAGTAATAAGGGAGTTAATTTACCAAAA
TCTAAGATAAAATTACCTGCACTTACGGATAAAGATAAGAAGGATTTGTTATTTGGTATAGAAAATGATGTTGAATATGT
GGCAGCTTCTTTTATAAGAAAAGCGGATGATGTTATAAAAATTAGAGAATTTTTAAATTCAAACGGAGGAGACTTTATAA
AAATAATATCTAAGATAGAGAATCAGGAAGGGCTTGATAATATAGATGAAATAATAGATAGCTCTGATGGAATAATGGTT
GCTAGAGGTGATTTAGGAGTTGAGATTCCTATTGAAAATTTACCACATTGGCAAAAGTTAATTATAAAGAAATGTAATGA
TAAAGGAAAATTTGTTATAACTGCAACTCAAATGCTTGATTCTATGATAAGGAATCCAAGGCCTACGAGAGCTGAAGCTT
CAGACGTTGCAAATGCTATACATGATGGTAGTGATGCTGTTATGTTAAGTGGGGAAACAGCAAATGGGAAATATCCTGTA
GAATCTTATGAAATAATGGATAAAATTATAATTACAACTGAGCAAAGTTTGGATTATGAAGGAAAACTCCAAAGGAAATT
ATCAAAAATAGAGTATAAAGATGTTCCTAATACGATCGCATTATTTTCTTGTACTACGGCAAATGAAGTTGGTGCAAAAG
CTATACTTGCCTGTACAAAATCAGGTGCTACAGCACAGTTTGTATCTAGATTTAGGCCGGAGTGTCCAATTATTTCTATA
ACACAAACTAAAAAAGTAGCGAGGATGTTATCGATTTATTGGGGGGTATATACTCAAACAATAAGTGAAACGATTGATAA
TACAGATATGTTAATCGATTTATCAGTAGATAAAGCGAAAAAAGAGTATAGTTTTAAAAATGGGGATTTAATAGTTGTTT
CAGCGAGTGTTCCTGCAAATTTCAAGGGTCATACTAATATGCTCAAAGTTCATGAAGTTTAA

Protein sequence :
MRKTKIVCTIGPASEKYEILKELIEKGMNVMRLNFSHGDFEEHGSRIKLVREISEELNKNVGIMLDTKGPEIRTKKFEGK
VLLNQGEEFIIYTKEDVVGDSTRCSVTYEDLYKDVEVGGKILIDDGLVALEIKNIEEGKITCVVLNSGEVSSNKGVNLPK
SKIKLPALTDKDKKDLLFGIENDVEYVAASFIRKADDVIKIREFLNSNGGDFIKIISKIENQEGLDNIDEIIDSSDGIMV
ARGDLGVEIPIENLPHWQKLIIKKCNDKGKFVITATQMLDSMIRNPRPTRAEASDVANAIHDGSDAVMLSGETANGKYPV
ESYEIMDKIIITTEQSLDYEGKLQRKLSKIEYKDVPNTIALFSCTTANEVGAKAILACTKSGATAQFVSRFRPECPIISI
TQTKKVARMLSIYWGVYTQTISETIDNTDMLIDLSVDKAKKEYSFKNGDLIVVSASVPANFKGHTNMLKVHEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-96 53
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-96 53
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-95 53
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-96 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_004856573.1 pyruvate kinase VFG0479 Protein 3e-96 53