Gene Information

Name : pdxS (RATSFB_0665)
Accession : YP_004857153.1
Strain : Candidatus Arthromitus sp. SFB-rat-Yit
Genome accession: NC_016012
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 770089 - 770964 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence : 
GTGAATAATAATCGTTATGAATTGAACAAAGAATTAGCAAAAATGCTAAAGGGTGGAGTTATTATGGATGTTACTACACC
TGAGCAAGCAAAAATTGCTGAAGAGTCAGGAGCTTGTGCTGTTATGGCTTTAGAACGTATACCTGCAGATATTCGTGCAG
CTGGTGGAGTATCTCGCATGAGTGATCCGAAAATGATAAAAGGAATTCAAGAAGCTGTTTCTATTCCAGTTATGGCAAAA
TGTCGTATTGGTCATTTTGTTGAAGCACAAATATTAGAAGCAATAGAGATTGATTATATTGATGAAAGTGAAGTTTTATC
GCCTGCTGATGATATTTTACACATTAATAAAAGAAATTTTAATGTTCCTTTTGTTTGTGGTGCAAAAGATTTAGGAGAAG
CTTTAAGAAGAATTAATGAAGGTGCTAGCATGATAAGAACAAAGGGTGAGCCAGGTACAGGAGATATCGTGCAAGCAGTT
AGACACATGAGAAAAATGAATTGTGAAATATCTAAAGTTTCATCGATGAGGGAAGATGAACTTTATAATGTAGCTAAAGA
ACTTCAGGTTCCTTATGATCTCTTATGTTATGTTCATGAAAATAAAAGGTTGCCTGTTGTTAATTTTGCAGCTGGTGGAA
TTGCTACTCCTGCAGATGCTGCACTTATGATGCAACTCGGAGCAGAAGGTGTTTTTGTAGGATCAGGAATTTTCAAATCG
GGAAACCCTGTAAAAAGAGCAACATCTATTGTACAAGCTGTTACAAATTATAATGATAGTAAACTTATTGCTAAATTATC
TGAAGATCTTGGAGAAGCAATGGTTGGAATTAATCCAGATGAAATTGAACTTCTTATGTCTGAAAGAGGTAAATAG

Protein sequence : 
MNNNRYELNKELAKMLKGGVIMDVTTPEQAKIAEESGACAVMALERIPADIRAAGGVSRMSDPKMIKGIQEAVSIPVMAK
CRIGHFVEAQILEAIEIDYIDESEVLSPADDILHINKRNFNVPFVCGAKDLGEALRRINEGASMIRTKGEPGTGDIVQAV
RHMRKMNCEISKVSSMREDELYNVAKELQVPYDLLCYVHENKRLPVVNFAAGGIATPADAALMMQLGAEGVFVGSGIFKS
GNPVKRATSIVQAVTNYNDSKLIAKLSEDLGEAMVGINPDEIELLMSERGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-85 69
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-85 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-85 68