Gene Information

Name : ssb (RATSFB_1332)
Accession : YP_004857820.1
Strain : Candidatus Arthromitus sp. SFB-rat-Yit
Genome accession: NC_016012
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1504431 - 1504862 bp
Length : 432 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAAGTAATATTGATAGGAAGGTTGACTAAAGACCCAGAGTTAAGGTTTACACCTAATGGTACGGCAGTATCAAC
GGTTACTTTAGCTATTGATAGAAAAGTAACCTCAAAAGAACAACCCAAAACAACAGATTTTATACAAGTTGTAATTTGGG
GGAAGCAAGCAGAAGCTACTGCTAATTACATAAATAAGGGATGTAAATTTGCTGTTTCTGGAAGGATTCAGACTAGAACA
TATGCCGATAAAGATAATAATAAAAGGTATATAACAGAAGTTGTAGCAGATGAAGTTTCATTTATAGATTGGGGGAATAA
ATCTTCTAATAGTAATACGCAAAACAACAGTGATTTTGGAAATTCTATTGATTATGGAGATATTCCTATGAGTGATGAAA
TGACATTGATTGATGAGGATGTACCGTTTTAA

Protein sequence :
MNKVILIGRLTKDPELRFTPNGTAVSTVTLAIDRKVTSKEQPKTTDFIQVVIWGKQAEATANYINKGCKFAVSGRIQTRT
YADKDNNKRYITEVVADEVSFIDWGNKSSNSNTQNNSDFGNSIDYGDIPMSDEMTLIDEDVPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 8e-24 52
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-23 52
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-23 52
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 8e-22 48
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-19 47
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 4e-20 47
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 9e-18 45
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 1e-17 45