|
Name : RATSFB_1001 (RATSFB_1001) Accession : YP_004857489.1 Strain : Candidatus Arthromitus sp. SFB-rat-Yit Genome accession: NC_016012 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 1146775 - 1148241 bp Length : 1467 bp Strand : - Note : - DNA sequence : ATGAATCCAGAAAATAGAAATAAAAAACTTACAACAGTTTTTGGAGCACCGGTATCAGATAATCAAAATACTATGACAGC AGGACCAAGAGGACCTATGCTACTTCAAGATGTATGGTTTTTAGAAAAACTTGCACATTTTGATAGAGAGGTAATACCAG AAAGAAGAATGCATGCAAAAGGTTCTGGAGCATATGGGACTTTTGTTGTTACGCATGATATTACGAAATATACTAAGGCT AAAATATTTTCAGAGATTGGTAAAAAAACTGATTTATTTATAAGATTTTCTACAGTTGCGGGTGAGCGTGGAGCTGCAGA TCTAGAGCGAGATATTAGAGGTTTTGCTATAAAATTTTATACAGAAGAGGGGAATTGGGATTTAGCAGGAAATAATACTC CAGTGTTTTTCTTAAGAGATCCACTAAAATTTCCAGATTTGAATCATGCTGTTAAAAGGGATCCAAGAACGAATATGAGA AGTGCAAAAAATAACTGGGATTTTTGGACATTACTTCCAGAGGCTCTTCATCAAGTTACAATTACAATGAGTGATAGGGG GATACCAGTATCATATAGGCACATGCATGGTTTTGGAAGTCATACTTTTAGTATGATAAATGATAAAAATGAGCGTGTTT GGGTTAAATTCCATTTTATTACTCAACAAGGAATTAAAAATTTAACAGATGAAGAAGCAGAGATAATAACAGGGAAAGAT CGTGAAGCACATCAACGTGATTTATATGATAGCATCGAAAAAGGTAATTATCCACGATGGAAAATGTATATTCAGGTAAT GACTGAAGAGCAGGCATTAAATATGCCGTATAATCCATTTGATTTGACAAAGGTTTGGTATAAGGCTGAATTTCCTTTAA TTGAGGTTGGATATTTAGAACTTAATCGCAACCCAGAAAACTATTTTGCAGAGGTCGAACAAGCAGCATTTAATCCGGCA AGTGTTGTACCTGGAATAGGTTTTTCCCCTGATAAAATGCTACAAGGAAGATTGTTTGCCTATGGTGATGCTCAAAGATA TAGACTTGGAGTGAATGTTCACCAAATACCTGTTAACGCACCTAGGTGTAAGGTTAATAGTTTTCATAGGGATGGTAAAA TGAGAGTAGATGGAAATTCTGGAAGTACTTTAGGTTATGAGCCGAATAGTTATGGTGAGTGGGAAGAACAACCAGAATAT AAGTTACCTTCGTTGGGCTTAAGTGGTGATGCTAATTGTTGGAATTTTAGGGAAGATGATAACGATTACTATACACAGCC AGGAAAATTATTTAGATTGATGTCATCAGAGCAAAAAAGAGCTTTATTTGAAAATACTGCTCGTTCTATGGGAGATATTC CAAAGGAAATTAAGATGAGGCATATATCAAATTGTTATAAAGCAGATCCAGAATATGGACAAGGTATTGCAGATGCTTTA GGAATTTGTATGAATGAAGTTAAATAG Protein sequence : MNPENRNKKLTTVFGAPVSDNQNTMTAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFVVTHDITKYTKA KIFSEIGKKTDLFIRFSTVAGERGAADLERDIRGFAIKFYTEEGNWDLAGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMR SAKNNWDFWTLLPEALHQVTITMSDRGIPVSYRHMHGFGSHTFSMINDKNERVWVKFHFITQQGIKNLTDEEAEIITGKD REAHQRDLYDSIEKGNYPRWKMYIQVMTEEQALNMPYNPFDLTKVWYKAEFPLIEVGYLELNRNPENYFAEVEQAAFNPA SVVPGIGFSPDKMLQGRLFAYGDAQRYRLGVNVHQIPVNAPRCKVNSFHRDGKMRVDGNSGSTLGYEPNSYGEWEEQPEY KLPSLGLSGDANCWNFREDDNDYYTQPGKLFRLMSSEQKRALFENTARSMGDIPKEIKMRHISNCYKADPEYGQGIADAL GICMNEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 3e-168 | 71 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-91 | 51 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-91 | 51 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-91 | 51 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 2e-94 | 51 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-91 | 51 |
