|
Name : serS (RATSFB_0008) Accession : YP_004856496.1 Strain : Candidatus Arthromitus sp. SFB-rat-Yit Genome accession: NC_016012 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 9403 - 10689 bp Length : 1287 bp Strand : + Note : - DNA sequence : ATGTTAGATTTAAAATTTATTGTTTATAATAAAGATTTTGTAAAACAAAAATTGAGTAATAGAGGAGAGGATTTTTTAGT TGACACAATAGATGATCTTATTGAATTTTATAAGGAAAAGAATTCTTTTATACTTAAAGTAGAAGAATTAAAGAATAAGA GAAATGTTTCTTCAAAAAAAATAGCTGAATTAAAAAAGAATGGTGAGAATGTTGATGATATCTTTAAGGAAATGAAAAAT TTAAGTGATAAAATCAAGGAATTAGATAAAAAAATACATATTTTAAATGAAAAAATAAATTATATAATGCTTAGAATTCC TAATTTACCTAGTGATGATGTACCAGAAGGTGATAGTGATCAAGACAATATTGAGGTCAGAAAATGGGGAGAACCAATTA AGCATGATTTTGAAATAAAAGCACATTGGGATATAGCTAAAAGTTTAGATATATTAGATTTTGAAAGAAGTGCTAAAGTT ACAGGATCTAGATTTGTGTTTTATAAAGGATTGGGGGCAAGATTAGAGAGAGCACTTATAAATTATTTTTTAGATGTACA AACGATGAAACATGGGTATGTAGAGATTATTCCACCTTATATGGCAAATAAAGATAGTTTTACAGGTACGGGTCAATTAC CAAAATTTGCAGATGATGCATTTTTAGTAGAGAATAAAGATTATTTTCTAATACCGACAGCAGAAATACCAGTTACGAAT TATTATAGAGATGAAATAATTAGTTTAAGTGAGACAAAACCTGTACAGAAATTTGTAGCTTATAGTGCTTGTTTTAGATC TGAGGCTGGTTCAGCCGGTAGAGATACGAGAGGTTTGATAAGGTTACATCAATTTAATAAAGTTGAATTGGTTAAGTTTT GTCGTGAAGAAGATTCTTATAATGAATTAGAGAAGCTTGTTAATGATGCTGAGTTTTTATTGAAAGAGTTAAAGTTACCT TATAGAGTTGTTAAAGTATGCAAAGGTGATTTAGGGTTTTCACAGTCCTTTAAATATGATATAGAAGTTTGGATGCCAAG TTATAATAGATATGTTGAAATATCTAGCTGTAGTAATTTTGAGAGTTTTCAGAGCCGTAGGGGCAATATAAGGTATAGAG AAAACAACTCATCTAAAACTAAATTTGTGCATACGTTAAATGGGTCAGGATTAGCTGTTGGTAGGACATTTGCAGCGATA CTTGAAAATTTCCAAACATCAGATTGTAGAGTTGTTATACCAGAAGTACTGAGGAAATACTTTAATGGATTAGAAATTAT ATCTTAA Protein sequence : MLDLKFIVYNKDFVKQKLSNRGEDFLVDTIDDLIEFYKEKNSFILKVEELKNKRNVSSKKIAELKKNGENVDDIFKEMKN LSDKIKELDKKIHILNEKINYIMLRIPNLPSDDVPEGDSDQDNIEVRKWGEPIKHDFEIKAHWDIAKSLDILDFERSAKV TGSRFVFYKGLGARLERALINYFLDVQTMKHGYVEIIPPYMANKDSFTGTGQLPKFADDAFLVENKDYFLIPTAEIPVTN YYRDEIISLSETKPVQKFVAYSACFRSEAGSAGRDTRGLIRLHQFNKVELVKFCREEDSYNELEKLVNDAEFLLKELKLP YRVVKVCKGDLGFSQSFKYDIEVWMPSYNRYVEISSCSNFESFQSRRGNIRYRENNSSKTKFVHTLNGSGLAVGRTFAAI LENFQTSDCRVVIPEVLRKYFNGLEIIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-109 | 55 |
