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Name : clpE (LIV_0942) Accession : YP_004854728.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Virulence Product : putative ATP-dependent protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 995423 - 997588 bp Length : 2166 bp Strand : - Note : - DNA sequence : ATGAATTGCGAAAAATGTAATCAAAATCAAGCTACAATCCAATTATATATGAATATTAACGGCAAACGTGTCGAAATGCC ACTTTGCGCGTCTTGTTATGCAGAAGTTAGAAATCAAGCAAACTTCGGGGGAAATGAATTTCCATCAGGTGGCTCTCCGT TCGACGATATTTTCCGTCAACTAAGTGGTGCTGCAAACCAAGCAAACCGCGAACACAAAAGTCAAGCGCAAGTACAAACT CAAGCAGGAAACGATGGCAATGGTTTGCTTGACGAATACGGTACTAATTTAACAGATATCGCAAAAAATAACCAACTAGA TCCAGTCATCGGTCGTGATAAGGAAATTAAGCGTGTGATTGAAATATTGAATCGCCGCAATAAAAACAATCCAGTGCTCA TTGGTGAACCTGGTGTTGGTAAAACTGCTGTTGTCGAAGGACTTGCAAATGCGATTATCGCTAGAGAGGTCCCAACGAAA CTATTAAATAAAGAGGTCATTTTACTTGATGTCGCTTCGCTTGTTTCCGGCACAGGTATCCGCGGTCAATTTGAAGAACG TATGAAACAGCTAATCAAAGAATTGCAAGAACGTAAAAACACCATTTTATTCATTGATGAAGTACACACTATTGTTGGGG CAGGGTCGGCAGAAGGTTCGATGGATGCTGGCAACATTTTAAAACCTGCACTTGCTCGTGGTGACTTACAAATGATTGGT GCAACTACACTTAAAGAATACCGCACTATCGAAAAAGATGCGGCACTTGAACGTCGCTTCCAACCGGTGACAGTAAATGA ACCAACTACAGAAGAAACATTAACTATTTTAAATGGTCTAAAGGATAAATATGAAGACTTCCATGAGGTTGTTTACTCAC CTGAAGCATTAAAAGCAGCTGTAGAGCTAAGTACACGTTACATTCAAGATCGTCATTTACCCGATAAAGCCATCGATTTA ATGGATGAAGTTGGTTCTAAATACAACTTAGCTATCGAAAAACTAGATGAAAACACCGTAAGTGAACGTGTTGCTCATTT AGAAGAAGAAAAAAATCAAGCTCTGCAAAAGGAAGACTATGAAAAAGCAGCCAAAGTTCGCGATGAAATTTCTCGCTTAG AAGAAAATAAAACTAGCAACGCTTTCTCGGAACGCCCTGTTATTCAAGCTTCTGATATCCAAGCAATCATTGAAGAAAAA ACAGGTATCCCAGTCGGACGTTTACAAGAAAATGAACAATCAAAAATGAAACATCTTGAAAGCAACCTATCCGGAAAAGT AATCGGCCAAGAAGATGCTGTGAAGAAAGTGGCTAAAGCAATTCGTCGCAGCCGCGTCGGTCTAAAAGCGAAACATCGTC CAATTGGTTCCTTCCTATTTGTTGGACCAACTGGGGTCGGAAAAACAGAACTTGGTCGCTCGCTTGCTCGCGAATTATTT GGTACAAGTGAAGCAATGATTCGTTTAGACATGAGTGAATTCATGGAAAAACACAGTGTTTCTAAATTAATTGGTTCTCC TCCAGGTTATGTTGGTCACGAAGAAGCTGGACAATTAACTGAAAAAGTTCGCCGCAACCCATACAGCATCATTCTTTTAG ATGAAATTGAAAAAGCGCACCCAGATGTTCAACATATGTTCTTACAAATTTTAGAAGATGGTCGTTTAACAGACTCTCAA GGTCGTACAGTTAGTTTTAAAGATACCGTCATCATTATGACAAGTAACGCTGGAGCAACTGACACAGAAGCTTCTGTCGG CTTTAATACTACTACTGATGCTAAACTTGAAAAAGGTTCTGACATTCTAGCAAAGCTAGGCGCATACTTCAAACCAGAAT TCCTAAACCGTCTAGATAGCGTCATCGAGTTTAAATCACTTGAAAAAGATGATTTAGTACAAATTATTGACTTAATGCTT GTTGATTTAAATACGATGCTTGCTCAAGAAGATGTTACTATTGAAGTGGCACCCGAAGTAAAAGAACATTTGATAGACCT TGGATACGATTCTAAATTCGGTGCTAGACCCCTTCGCCGGACAATCCAAGAACATTTAGAAGATGCGATTGCTGACTCAC TTATCGATCAACCAGAAGCAACACACTTAGTCGCAACGCTCAATGATGAAAAAGAAATTGTCATCAAAGAACAAGTAACT GCATAA Protein sequence : MNCEKCNQNQATIQLYMNINGKRVEMPLCASCYAEVRNQANFGGNEFPSGGSPFDDIFRQLSGAANQANREHKSQAQVQT QAGNDGNGLLDEYGTNLTDIAKNNQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIIAREVPTK LLNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQMIG ATTLKEYRTIEKDAALERRFQPVTVNEPTTEETLTILNGLKDKYEDFHEVVYSPEALKAAVELSTRYIQDRHLPDKAIDL MDEVGSKYNLAIEKLDENTVSERVAHLEEEKNQALQKEDYEKAAKVRDEISRLEENKTSNAFSERPVIQASDIQAIIEEK TGIPVGRLQENEQSKMKHLESNLSGKVIGQEDAVKKVAKAIRRSRVGLKAKHRPIGSFLFVGPTGVGKTELGRSLARELF GTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQ GRTVSFKDTVIIMTSNAGATDTEASVGFNTTTDAKLEKGSDILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIIDLML VDLNTMLAQEDVTIEVAPEVKEHLIDLGYDSKFGARPLRRTIQEHLEDAIADSLIDQPEATHLVATLNDEKEIVIKEQVT A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-150 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_004854728.1 | putative ATP-dependent protease | VFG0080 | Protein | 0.0 | 93 |
| clpE | YP_004854728.1 | putative ATP-dependent protease | VFG0079 | Protein | 3e-155 | 53 |
