Gene Information

Name : LIV_0784 (LIV_0784)
Accession : YP_004854580.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Resistance
Product : putative amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 842689 - 843417 bp
Length : 729 bp
Strand : +
Note : Similar to amino acid ABC transporter, ATP-binding protein

DNA sequence : 
ATGACTAAACTCAAAGTAACTGGACTTAAAAAAAGCTTTGGCGCGAATGAAGTGCTAAAAGGTATTGATATCGAAGTGAA
AGAAGGCGAAGTGGTCTGCGTAATTGGACCATCTGGCTCCGGAAAAAGCACCTTCCTTCGCTGCATGAACAACTTAGAAG
AAATTACAGCCGGAGAAGTCATTGTCGATGATTTTAACATTACAGATAAAAAAGTAGATATTAACAAAGTACGCGAAAAT
ATCGGAATGGTGTTTCAACATTTTAACCTTTTTCCACATCTATCTGTTTTAGAAAATATTACCCTTGCTCCTGTAGAACT
GAAAAAAATGGATAAAGAAGCTGCGAAAAGTAATGCGGTTCGTCTATTAGAACAAGTGGGCCTAAAAGAAAAAGCAGATG
AATACCCAAGTCAACTTTCTGGAGGACAAAAACAGCGGGTTGCGATTGCTAGAGCTCTTGCAATGGATCCAGATATTATG
TTATTCGATGAACCAACCTCTGCACTCGATCCAGAAATGGTCGGAGAAGTACTAGGCGTTATGAAAGAATTAGCCAAACG
TGGGATGACCATGATGATCGTCACACACGAAATGGGATTTGCTCGTGAAGTTGGTGATCGGGTCATCTTTATGGATGGTG
GCTATATCGTTGAAGAAGGTAAACCCGCAGATATATTTGACCATCCAACAAATCAAAGAACCATTAGTTTTTTAGATAAA
GTTTTGTAA

Protein sequence : 
MTKLKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKSTFLRCMNNLEEITAGEVIVDDFNITDKKVDINKVREN
IGMVFQHFNLFPHLSVLENITLAPVELKKMDKEAAKSNAVRLLEQVGLKEKADEYPSQLSGGQKQRVAIARALAMDPDIM
LFDEPTSALDPEMVGEVLGVMKELAKRGMTMMIVTHEMGFAREVGDRVIFMDGGYIVEEGKPADIFDHPTNQRTISFLDK
VL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-27 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-27 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_0784 YP_004854580.1 putative amino acid ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-28 41
LIV_0784 YP_004854580.1 putative amino acid ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-29 41