|
Name : nifJ (LIV_0767) Accession : YP_004854564.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Virulence Product : putative pyruvate-flavodoxin oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : - Position : 819279 - 822929 bp Length : 3651 bp Strand : + Note : Highly similar to pyruvate-flavodoxin oxidoreductase DNA sequence : ATGCGAAACAGAAAGACAATGGATGGAAACACTGCTGCAGCCTATATTTCTTACGCATTTACAGAAGTTGCAGCAATCTA TCCAATTACCCCGTCCTCTACTATGGCAGAACTCGTAGACGAATGGGCATCAAAAGACAAAAAGAATTTATTTAATGAAC CAGTGAAAGTAGTAGAAATGCAATCAGAAGCAGGGGCAGCTGGAACAGTTCACGGCTCACTTCAAGCAGGGGCGCTGACT AGTACATACACCGCTTCCCAAGGTTTACTACTGATGATTCCAAACATGTATAAAATTGCCGGAGAACTTTTACCAACTGT TTTCCATGTATCTGCAAGAACAATTTCGGCAGCATCCCTTAATATTTTTGGCGATCATAGTGATGTAATGGCAGCAAGAC AAACTGGTTTTGCGATGTTAGCAGAAGGATCTGTCCAAGAAGTAATGGATTTATCTGCAGTTGCTCACCTTGCCGCTTTA AAAGGAAGCTTACCATTTTTAAATTTCTTTGATGGATTTAGAACAAGTCATGAATTACAAAAAATTGAGGTGCTTGAATA TAGTGAATTAGAAAATTTACTTGATAAAACTGCCTTGCAACAATTTAGAGATCGAGCGATGACGCCAAACAATCCAAAAA CAATTGGCTCTAACCAAAATCCAGATATCTTTTTCCAACAAAGGGAAACGGTTAACCGCTACTATGAAGAGATTCCAGGT ATTGTGCAGGATTATATGCAAGAAATTAATCAACTACGTGGTACAAATTACGATCTTGTAAATTATTATGGTGCGGAAGA TGCAACAGATGTCATTGTTGCAATGGGTTCTGTTACTCCAGTGATAGAGCAAGTAATTGATTATTTAATGAAGCAAGGAG AAAAAGTCGGCTTACTAAATATCCGTTTATATCGTCCGTTCCCAGCAGAAAACTTTTTAGAAAAATTACCGAAAACAGTG GAGCGTGTTGCTGTACTTGACCGGACGAAGGAACCAGGATCAGGCGGCGAACCACTTTTACTAGATGTGCAAAGTGTTCT TTATGACAGTGACGTTAGACCAAGTGTTATTGGAGGAAGATACGGCTTAGGTTCAAAAGATGTTACACCAGACCAGATTC TTGGTGTTTATTCGCACCTAAAGGAAGCAAAACCAAAACCGCGCTTTACGATTGGGATTACCGATGATATCACAAATCTT TCTATTGAGAGCAAAGGACCAAGTGATTTAACTTCAGAAAAAACGTTCCAATGTAAATTCTGGGGATTCGGTTCAGATGG AACAGTCGGTGCTAATAAAGCAGCGATTAAAATTATTGGGGATAATACGGACTTATATGCACAAGGCTACTTTTCCTATG ATTCGAAAAAGTCAGGTGGGCTAACGGTTTCCCATTTGCGATTTGGAGAGAATCGGATTCGGTCTGCCTATTTAATCAAG CAAGCAGATTTCGTTTCATGTTCGACTTCCGCCTATTTACGTTCGTACGATTTGCTCAAAGGCTTAAAACCAGGTGGGAT ATTTTTACTCAATACTATTTGGGAAGGCGAACAGTTAGAGCGTCATTTACCAGCTAGTATGCGTGAATATATTGCGAAAA ATGATATTCAATTTTATACCTTAAATGCAATGAAAATCGCTGGTAATGCGGGACTTGGGCGAAGAATTAATACTGTGATG CAAACCGCCTTTTTCCGTGTTACCAATATTTTACCGTTCGAAAAAGCACTTGCTGATTTAAAAGAAGCTGCTATTTTGAC TTACGGGAAGAAAGATATGAAAGTTGCCGAAAAAAATATCGCAGCGATGGATCAAACGGTTGCTAATTTGCGCAAAGTAG AAGTGCCAGCAAGCTGGGCCAATCCAGAAACTACGACACTTGAGAAAACTTCTGTTGACCGTCCATCCTACGTGAAAAAT ATTCTCGAACCAGTGAATCGTTTGGAAGGAGATGCTTTATCTGTCGGTGATTTAATCTCGAATGGGATGGTAAGTGGGGC TTATCCAGCAGGTACTGCAGCATATGAAAAACGTGGTATTGCACTAGAAGTTCCAGAATGGATTTCGGAAAATTGTACGA TGTGTAATGAATGTGCCTTCGTTTGTCCACATGCAGCTATTCGGCCAATTTTAACAGATGAAGAAGAAATGGAAGACGCT CCAGAAGGCTTTATGACTCGTGAAATGCGTGGGAAAGATGGTCTTCGTTACCGGATTCAAGTATCGCCAATGGACTGCAC AGGCTGTAATTTATGCGCAGAAACTTGTCCAGCAAAAGAAAAAGCTTTAGTGATGAAACCATTTGAAGAAGTAGCAGCGA AAGAAAATCCTAACTGGTCCTTTGCGATTAATGTGAAACCGAAGAAAAATCCTAGTAAGAAAAATACCGTTCCAGGAAGT CAGTTCGAACAACCATTACTTGAGTTTTCGGGTGCTTGTGCAGGTTGTGGTGAAACACCTTATGTTAAATTATTAACGCA AATGTTTGGCGACCGGATGATGATTGCCAACGCGACTGGTTGTTCATCCATTTGGGGAGCATCGGCGCCTGCAACACCAT ACACGGTCAATGATCACGGTCACGGACCGGCATGGGGGAACTCACTATTAGAAGATAATGCAGAATACGGTTACGGCATG TATTTGGCAAATCAAACGATGCGAAAAGCTCTAAGTAACAAGGTGTCAAAAGTGCTTGCCGAAGAAACACTTTCAGACAA TTTGCGCGAGGCACTTGTCGAATGGCAAACTAAAATGGACGTAAGCGAAGACACTCGCGAACGAGCAGAACAGTTACAAC TTGCGCTTCTGAGTGAAATGAATGGAAACGCGGTATTAGAATCGATTTATAATGATCGCGAGCTATTTATTAAACGTTCG CAGTGGATGATTGGTGGCGATGGATGGGCTTATGATATTGGTTTTGGCGGAATTGACCATGTTTTAGCATCGGGAGAAGA TGTTAATATATTCGTCATGGATAATGAAGTTTACTCCAATACAGGTGGTCAGTCATCTAAAGCAACACCAACTGCCGCTA TAGCCAAATTCGCTTCTGGCGGGAAATCCGTTGGGAAAAAAGACCTCGGTATAATGGCAATGAGTTATGGTAATATTTAT GTAGCTCAAATTGCGATGGGAGCAAGTAAACGTCAAACTTTAAAAGCGATGGAGGAAGCAGAAGCATACCCTGGTCCATC CTTAATTATTGCTTACACACCATGTATTAATCATGGAATATCTAGTGGTATGAAGACAATGCTAACGGAAACTCAAAAAG CTGTCGAATGTGGCTATTGGAGCTTATATCGTTATAATCCAGCACTAGAAGAAAAAGGGAAAAATCCAATGACGATGGAC TTCAAAAAAGTTGATTTTGATCAATTTGAAGATTTCTTAAAAAGAGAAACGCGTTATTCAGCCTTATATAAAGCAAATCC AGAAGTAGCTCGTAAGCTATCGGAAAAAACACGGACGGATGCAGAAAAACGCTTTAAACGATATGGGACGATGGCTGGTC TAGACTTAGAAAAAATCTTAAAGAAAAAAGAAGTCGCTGAAACTGTCAATACGGTGCCAGCTGATGACGAACGTGCCGCA AGAAAAGCAGCTAGAGAAGCTAGAAGATTAGCGCGCGAACAAGAGAAATAA Protein sequence : MRNRKTMDGNTAAAYISYAFTEVAAIYPITPSSTMAELVDEWASKDKKNLFNEPVKVVEMQSEAGAAGTVHGSLQAGALT STYTASQGLLLMIPNMYKIAGELLPTVFHVSARTISAASLNIFGDHSDVMAARQTGFAMLAEGSVQEVMDLSAVAHLAAL KGSLPFLNFFDGFRTSHELQKIEVLEYSELENLLDKTALQQFRDRAMTPNNPKTIGSNQNPDIFFQQRETVNRYYEEIPG IVQDYMQEINQLRGTNYDLVNYYGAEDATDVIVAMGSVTPVIEQVIDYLMKQGEKVGLLNIRLYRPFPAENFLEKLPKTV ERVAVLDRTKEPGSGGEPLLLDVQSVLYDSDVRPSVIGGRYGLGSKDVTPDQILGVYSHLKEAKPKPRFTIGITDDITNL SIESKGPSDLTSEKTFQCKFWGFGSDGTVGANKAAIKIIGDNTDLYAQGYFSYDSKKSGGLTVSHLRFGENRIRSAYLIK QADFVSCSTSAYLRSYDLLKGLKPGGIFLLNTIWEGEQLERHLPASMREYIAKNDIQFYTLNAMKIAGNAGLGRRINTVM QTAFFRVTNILPFEKALADLKEAAILTYGKKDMKVAEKNIAAMDQTVANLRKVEVPASWANPETTTLEKTSVDRPSYVKN ILEPVNRLEGDALSVGDLISNGMVSGAYPAGTAAYEKRGIALEVPEWISENCTMCNECAFVCPHAAIRPILTDEEEMEDA PEGFMTREMRGKDGLRYRIQVSPMDCTGCNLCAETCPAKEKALVMKPFEEVAAKENPNWSFAINVKPKKNPSKKNTVPGS QFEQPLLEFSGACAGCGETPYVKLLTQMFGDRMMIANATGCSSIWGASAPATPYTVNDHGHGPAWGNSLLEDNAEYGYGM YLANQTMRKALSNKVSKVLAEETLSDNLREALVEWQTKMDVSEDTRERAEQLQLALLSEMNGNAVLESIYNDRELFIKRS QWMIGGDGWAYDIGFGGIDHVLASGEDVNIFVMDNEVYSNTGGQSSKATPTAAIAKFASGGKSVGKKDLGIMAMSYGNIY VAQIAMGASKRQTLKAMEEAEAYPGPSLIIAYTPCINHGISSGMKTMLTETQKAVECGYWSLYRYNPALEEKGKNPMTMD FKKVDFDQFEDFLKRETRYSALYKANPEVARKLSEKTRTDAEKRFKRYGTMAGLDLEKILKKKEVAETVNTVPADDERAA RKAAREARRLAREQEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 52 |
