Gene Information

Name : LIV_0751 (LIV_0751)
Accession : YP_004854550.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 798443 - 799111 bp
Length : 669 bp
Strand : +
Note : Similar to ABC transporter, ATP-binding protein

DNA sequence : 
ATGATATTAATCATGAAAAATATTTCGAAAGGTTATCAAGATGGCGAACAAGTTATTGAGGTTTTAAAAAATGTTTCTTT
AGAAGTATCACAAGGAGAATTTGTCGCAATTGTCGGACCATCTGGAGCTGGAAAAAGTACTTTCTTATCTATAGCAGGTG
CGTTATTATCTCCAACCAAAGGAGAAATTTCGATTGGGGATAAGCGTTTAAACAATTTTTCAGGCAAAAAATTAACGAAA
GTTCGCCTGGAGAAGATTGGCTTTATTTTCCAAGGGGCAAATTTGATTCCATATTTAAATGTACGTGACCAACTGTTATT
AATTGCTGAACTAGCCGGAAAAAAAGGCAAAGAGGCAAAAGAGAAAGCAGATGCGTTATTGAACGAACTAGGTTTAACTG
CGCGGCGGAACAACTATCCTGAAAGCTTATCAGGCGGAGAAAAACAACGGGTGGCAATTGCTCGGGCGCTGATGAACAAT
CCGGATATCATTTTAGCAGATGAGCCTACAGCAAGTCTGGATGCAAATCGTGGTCATAAAGTAGTTCAAATGATAGCTGA
TGAAGTCAAACGAAAAAATAAAGCTGCCATTATGGTTACGCATGACGAACGAGTATTAGACTTGGTAGATCGAGTGATTC
GAATAGAAGATGGTTATTTGAAAGAGTGA

Protein sequence : 
MILIMKNISKGYQDGEQVIEVLKNVSLEVSQGEFVAIVGPSGAGKSTFLSIAGALLSPTKGEISIGDKRLNNFSGKKLTK
VRLEKIGFIFQGANLIPYLNVRDQLLLIAELAGKKGKEAKEKADALLNELGLTARRNNYPESLSGGEKQRVAIARALMNN
PDIILADEPTASLDANRGHKVVQMIADEVKRKNKAAIMVTHDERVLDLVDRVIRIEDGYLKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 5e-44 46
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-36 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_0751 YP_004854550.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-36 45
LIV_0751 YP_004854550.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-33 42
LIV_0751 YP_004854550.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-30 41