Gene Information

Name : LIV_0073 (LIV_0073)
Accession : YP_004853908.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Virulence
Product : putative soluble internalin
Function : -
COG functional category : S : Function unknown
COG ID : COG4886
EC number : -
Position : 80225 - 81127 bp
Length : 903 bp
Strand : +
Note : similar to soluble internalin (internalin C)

DNA sequence :
ATGAAAAAAGATTGGATGAAAATTTTCTTAATAGGAATGTTAGTAACGTTTATTGTTACATGCGTTAACACAAGTTTAGA
AACAAAGGTACAGGCTGCGAGTATTCCACATCCAATGTCAATTAAACAAATCTTTCCAGATCCAGGTCTAGCGAATGAAG
TGAAAAGAAGTTTGGGTAAGGAGAGTGTGGCAAGTTTTGTCTCCCAAGAGGAGCTAGATGAAGTACAGAAATTCAATGGA
GATAATTGCAACATTCAATCTCTTGAAGGAATGCAATATTTTACTAATTTAAAAGAGCTGTTTCTATCTCATAATCAAAT
AAGTGACCTTAGTCCGTTAAAGGATTTAACCAAGTTAGAAGAGTTGAGCTTGAATAGAAATAAACTGAAAAAGTTAAACG
GGATTCCAAGTGCTTGTTTAGAACGCTTATTTGTAGATGATAATGAACTTAGAGATACTGATTCGCTTGTTCATTTGGAA
AATTTAGAAATCTTATCTATTCGTAAAAATAAACTAAGAAGCATTGGGGCGCTTTGCTTTTTACCTAAACTAGAGGTACT
GGATTTGCATGGAAATGAACTAAGAAATGTATCTGAGGTAAGGGGATTAAAGAAGATAAACTGGATAGATTTAACGGGTC
AAAAATGTGTAAATAAACCAGTGAAATACCAGCGAGAATTGTTCATTACAAATACAGTCAAAGAGCCAGATGGAACATTA
ATTGCTCCAAATTTTATCAGTAATAATGGAATATATGTAGATGGCTGTGTTATATGGGATTTACCTGTTTACATGAATGA
AGTAAGTTATACGTTTAGTGAACTTATCAGTGTTGGAGAAACAGAGGCAATGTTTGATGGAACAGTGGTACAGCCTTTAT
TTTACAAGGTGTTTGGAAGTTGA

Protein sequence :
MKKDWMKIFLIGMLVTFIVTCVNTSLETKVQAASIPHPMSIKQIFPDPGLANEVKRSLGKESVASFVSQEELDEVQKFNG
DNCNIQSLEGMQYFTNLKELFLSHNQISDLSPLKDLTKLEELSLNRNKLKKLNGIPSACLERLFVDDNELRDTDSLVHLE
NLEILSIRKNKLRSIGALCFLPKLEVLDLHGNELRNVSEVRGLKKINWIDLTGQKCVNKPVKYQRELFITNTVKEPDGTL
IAPNFISNNGIYVDGCVIWDLPVYMNEVSYTFSELISVGETEAMFDGTVVQPLFYKVFGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
i-inlC CAA68917.1 internalin C Virulence LIPI-2 Protein 7e-94 74
inlC CAA68919.1 internalin C Virulence Internalin Protein 1e-91 71
i-inlK CAC80807.1 internalin K Virulence LIPI-2 Protein 3e-73 59
i-inlD CAA68916.1 internalin D Virulence LIPI-2 Protein 2e-63 55
i-inlF CAI59953.1 i-InlF protein Virulence LIPI-2 Protein 7e-69 54
i-inlF CAA71105.1 i-InlF protein Virulence LIPI-2 Protein 7e-69 54
i-inlF CAA74581.1 i-InlF protein Virulence LIPI-2 Protein 2e-62 52
i-inlL CAC80808.1 i-InlL protein Virulence LIPI-2 Protein 2e-41 43
i-inlH CAC20609.1 internalin H Virulence LIPI-2 Protein 4e-46 41