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Name : xylA (LIV_0505) Accession : YP_004854313.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Unknown Product : putative xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 545743 - 547056 bp Length : 1314 bp Strand : + Note : similar to xylose isomerase DNA sequence : ATGAGCTATTTTCCACAAGTAGAAAAAATTCAATTTGAAGGTAAGGATACGAAAAACCGCTTGGCATTTCGGCATTATCA AGCGGACGAGGTGGTTCTTGGAAAACCAATGAAAGAACATTTGCGTTTTGCAGTAGCTTACTGGCATACGATGACACAAG ATGGTAGTGATCCGTTCGGTATGGCTACGAATGAGCGGACTTGGATTGGTCAAACAGAGATGGAAACAGCGAAGAATCGT GTGGAAGCATTTTTTGAAATTCTTGAAAAATTGGGCGTGGAATATTTTTGTTTCCATGATATTGATGTAGCACCAGCAGG CGATTCTATTAAGGATTTCATGAATAACTTAGATGAAATTACTGATTTAATTAGAGTGAAAATGGACGAAACTGGTATTA AATTACTTTGGAACACAGCGAATATGTTTTCTCATCCTCGTTTTAATAATGGCGCCGGCTCGACAAATGACCCAGAAGTG TTTGCCTATGCAGCAGCGCAAGTGAAAAAAGGGCTAGACATCTCTAAGAAACTAGGCGGAGCAAACTATGTATTTTGGGG TGGTCGCGAGGGTTACGAAACGCTTTTAAACACGGATATGAAATTTGAACAAGACAACATTGCTCGTTTATTTAAAATGG TGGTTGCCTACGCCGAAAAGATTGGTCATAAACCGCAATTTTTAATTGAACCAAAACCGAAAGAACCGTCCAAACATCAA TATGATTTTGATGCGGCAACAACCATGGCATTTATCCAAAAATATGGTTTAGCAGGTGATTTTAAGCTGAATTTAGAAGC AAACCATGCCACACTTGCTGGGCACACTTTTGAACATGAATTACGTGTAGCTCGTGATTATAACGCTCTTGGTTCAATTG ACGCTAACCAAGGAGACATGTTACTTGGGTGGGATACCGATGAATTTCCGACAAATGTCGTTGATGTAACACTTGCGATG TATGAAATTTTACAAAATGGTGGAATTGCGCCAGGTGGCATTAATTTTGATGCAAAAGTGAGACGTTCTTCGTTTGCGAT GGAAGACTTATTACTTGCGCATATTGCAGGGATGGACACGTTCGCACGTGGGTTAAAAGCAGCAGCTAAATTAACAGAAG ATAAGTTTATCGAGAATATCCTTCGTGAACGCTATGGTAAATGGGTGGATACAGAGATTGGAAAATCCATTCTAGAAAAC AAAGAGGATTTGGAATCACTATCGAAATATGCGTATCAACATGGAGATGATATTCAACTGAAATCTAGCCATATCGAACA TGTAAAATCGGTGTTGAATGATTATATCTTTTAA Protein sequence : MSYFPQVEKIQFEGKDTKNRLAFRHYQADEVVLGKPMKEHLRFAVAYWHTMTQDGSDPFGMATNERTWIGQTEMETAKNR VEAFFEILEKLGVEYFCFHDIDVAPAGDSIKDFMNNLDEITDLIRVKMDETGIKLLWNTANMFSHPRFNNGAGSTNDPEV FAYAAAQVKKGLDISKKLGGANYVFWGGREGYETLLNTDMKFEQDNIARLFKMVVAYAEKIGHKPQFLIEPKPKEPSKHQ YDFDAATTMAFIQKYGLAGDFKLNLEANHATLAGHTFEHELRVARDYNALGSIDANQGDMLLGWDTDEFPTNVVDVTLAM YEILQNGGIAPGGINFDAKVRRSSFAMEDLLLAHIAGMDTFARGLKAAAKLTEDKFIENILRERYGKWVDTEIGKSILEN KEDLESLSKYAYQHGDDIQLKSSHIEHVKSVLNDYIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 3e-165 | 77 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 2e-165 | 77 |
