Gene Information

Name : LIV_0333 (LIV_0333)
Accession : YP_004854150.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 365568 - 366242 bp
Length : 675 bp
Strand : +
Note : Similar to ABC transporter (ATP-binding protein)

DNA sequence : 
ATGATACAGCTAGTTAATATTTTCAAGTCATACCAAATGGGAGACAACAAAGTAAACGCATTAGATGATGTGTCTTTTTG
TATAGATTCAGGAGAGTTTATTGCAATTATCGGTCCTTCTGGTTCAGGAAAATCTACATTAATGAATATTCTTGGCATAC
TAGATAAGGCGAGTTTAGGAAAATATTATTTAAAAAAGACAAATTTAACAAAATTATCGCCAAAAAAAGTAGCGAAAATT
AGAAATGAAATGATTGGATTTGTTTTTCAGCAATTTAATTTATTGCCAAGACTTACCGCATTTGAAAATGTTGAATTACC
GCTAATCTATCGAGGTGTCGACAAAGCTGTGCGAAGACGAAAAGTCTTGAGAAGTTTAGAGCGAGTGGGTTTGTTAGATA
TGCAAAAACACTTACCGACACAACTATCGGGCGGACAACAGCAACGTGTCGCGATAGCCAGAGCGATTACAGGAAATCCA
GAAATTTTATTAGCAGATGAACCAACAGGAGCTTTAGATTCCAAAACAGGTGAAGAAGTGATGGCTTTACTAAAAGAAAT
TCATCAGGAAGGTAACACGCTAATTATAATTACTCACGACATAAATATTGCTAAACAAGCAGAACGAATATTAGAAATAA
AAGATGGAAAACTCCGTGAATGGAATGAGAAATGA

Protein sequence : 
MIQLVNIFKSYQMGDNKVNALDDVSFCIDSGEFIAIIGPSGSGKSTLMNILGILDKASLGKYYLKKTNLTKLSPKKVAKI
RNEMIGFVFQQFNLLPRLTAFENVELPLIYRGVDKAVRRRKVLRSLERVGLLDMQKHLPTQLSGGQQQRVAIARAITGNP
EILLADEPTGALDSKTGEEVMALLKEIHQEGNTLIIITHDINIAKQAERILEIKDGKLREWNEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_0333 YP_004854150.1 putative ABC transporter ATP binding protein NC_012469.1.7686878. Protein 6e-51 54
LIV_0333 YP_004854150.1 putative ABC transporter ATP binding protein NC_008702.1.4606598. Protein 6e-41 51
LIV_0333 YP_004854150.1 putative ABC transporter ATP binding protein CP001581.1.gene598.p Protein 1e-34 46
LIV_0333 YP_004854150.1 putative ABC transporter ATP binding protein CP001581.1.gene798.p Protein 2e-35 43
LIV_0333 YP_004854150.1 putative ABC transporter ATP binding protein NC_012469.1.7685735. Protein 5e-33 43
LIV_0333 YP_004854150.1 putative ABC transporter ATP binding protein NC_012469.1.7686946. Protein 2e-26 42