Gene Information

Name : LIV_0308 (LIV_0308)
Accession : YP_004854127.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 342968 - 343171 bp
Length : 204 bp
Strand : -
Note : Similar to putative transcription regulator

DNA sequence :
TTGAAAGTGACAAATCGGGTTAAAACGTTACGCGAAGAAAAAGGGATTGCGCAAAATGATTTAGCTTCGATATTAGAGGT
TTCAAGGCAAACCATTCACGCGATTGAGAAAGGGAAATATAATCCAAGTTTAGAGCTTAGTTTGAAGATAGCTAAGTATT
TTGAGTTAGCAGTAGAAGAGATATTTCAGCTAGAGGAGGCATAG

Protein sequence :
MKVTNRVKTLREEKGIAQNDLASILEVSRQTIHAIEKGKYNPSLELSLKIAKYFELAVEEIFQLEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-13 58
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-13 58
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-10 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_0308 YP_004854127.1 putative transcriptional regulator VFG2168 Protein 5e-14 58
LIV_0308 YP_004854127.1 putative transcriptional regulator VFG2175 Protein 5e-14 58